Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6076 | 18451;18452;18453 | chr2:178730174;178730173;178730172 | chr2:179594901;179594900;179594899 |
N2AB | 5759 | 17500;17501;17502 | chr2:178730174;178730173;178730172 | chr2:179594901;179594900;179594899 |
N2A | 4832 | 14719;14720;14721 | chr2:178730174;178730173;178730172 | chr2:179594901;179594900;179594899 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs371110666 | -0.076 | None | N | 0.071 | 0.048 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/S | rs371110666 | -0.076 | None | N | 0.071 | 0.048 | None | gnomAD-4.0.0 | 6.8435E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99541E-07 | 0 | 0 |
A/T | None | None | None | N | 0.073 | 0.052 | 0.0551355673512 | gnomAD-4.0.0 | 1.3687E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79908E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4697 | ambiguous | 0.4856 | ambiguous | -0.706 | Destabilizing | 0.356 | N | 0.303 | neutral | None | None | None | None | N |
A/D | 0.2013 | likely_benign | 0.2079 | benign | -0.378 | Destabilizing | 0.029 | N | 0.329 | neutral | N | 0.487878175 | None | None | N |
A/E | 0.1635 | likely_benign | 0.1756 | benign | -0.533 | Destabilizing | 0.016 | N | 0.295 | neutral | None | None | None | None | N |
A/F | 0.2337 | likely_benign | 0.2619 | benign | -0.933 | Destabilizing | 0.214 | N | 0.485 | neutral | None | None | None | None | N |
A/G | 0.1129 | likely_benign | 0.119 | benign | -0.357 | Destabilizing | 0.012 | N | 0.189 | neutral | N | 0.487878175 | None | None | N |
A/H | 0.3476 | ambiguous | 0.3608 | ambiguous | -0.415 | Destabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | N |
A/I | 0.1191 | likely_benign | 0.1333 | benign | -0.337 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
A/K | 0.2386 | likely_benign | 0.2488 | benign | -0.564 | Destabilizing | 0.016 | N | 0.29 | neutral | None | None | None | None | N |
A/L | 0.1068 | likely_benign | 0.1195 | benign | -0.337 | Destabilizing | 0.002 | N | 0.283 | neutral | None | None | None | None | N |
A/M | 0.1334 | likely_benign | 0.1502 | benign | -0.288 | Destabilizing | 0.007 | N | 0.211 | neutral | None | None | None | None | N |
A/N | 0.1449 | likely_benign | 0.1568 | benign | -0.223 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
A/P | 0.0959 | likely_benign | 0.1021 | benign | -0.289 | Destabilizing | None | N | 0.201 | neutral | N | 0.391060917 | None | None | N |
A/Q | 0.2233 | likely_benign | 0.2335 | benign | -0.516 | Destabilizing | 0.003 | N | 0.191 | neutral | None | None | None | None | N |
A/R | 0.2462 | likely_benign | 0.2615 | benign | -0.11 | Destabilizing | 0.072 | N | 0.337 | neutral | None | None | None | None | N |
A/S | 0.0846 | likely_benign | 0.0876 | benign | -0.454 | Destabilizing | None | N | 0.071 | neutral | N | 0.437083995 | None | None | N |
A/T | 0.0706 | likely_benign | 0.0718 | benign | -0.528 | Destabilizing | None | N | 0.073 | neutral | N | 0.420383747 | None | None | N |
A/V | 0.0764 | likely_benign | 0.0834 | benign | -0.289 | Destabilizing | None | N | 0.125 | neutral | N | 0.452282734 | None | None | N |
A/W | 0.5518 | ambiguous | 0.5981 | pathogenic | -1.068 | Destabilizing | 0.864 | D | 0.423 | neutral | None | None | None | None | N |
A/Y | 0.3219 | likely_benign | 0.3438 | ambiguous | -0.707 | Destabilizing | 0.356 | N | 0.466 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.