Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6078 | 18457;18458;18459 | chr2:178730168;178730167;178730166 | chr2:179594895;179594894;179594893 |
N2AB | 5761 | 17506;17507;17508 | chr2:178730168;178730167;178730166 | chr2:179594895;179594894;179594893 |
N2A | 4834 | 14725;14726;14727 | chr2:178730168;178730167;178730166 | chr2:179594895;179594894;179594893 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs748917636 | -0.305 | 0.837 | D | 0.714 | 0.546 | 0.457741393631 | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.0304E-04 | None | 0 | None | 8.01E-05 | 2.35E-05 | 0 |
D/N | rs748917636 | -0.305 | 0.837 | D | 0.714 | 0.546 | 0.457741393631 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 9.44E-05 | 0 | 2.94E-05 | 0 | 0 |
D/N | rs748917636 | -0.305 | 0.837 | D | 0.714 | 0.546 | 0.457741393631 | gnomAD-4.0.0 | 1.42571E-05 | None | None | None | None | N | None | 1.33558E-05 | 1.66889E-05 | None | 0 | 1.3397E-04 | None | 3.12607E-05 | 0 | 1.10203E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8565 | likely_pathogenic | 0.7514 | pathogenic | -0.042 | Destabilizing | 0.645 | D | 0.822 | deleterious | D | 0.612994591 | None | None | N |
D/C | 0.9685 | likely_pathogenic | 0.9456 | pathogenic | 0.023 | Stabilizing | 0.995 | D | 0.825 | deleterious | None | None | None | None | N |
D/E | 0.7177 | likely_pathogenic | 0.6431 | pathogenic | -0.694 | Destabilizing | 0.477 | N | 0.639 | neutral | D | 0.61851654 | None | None | N |
D/F | 0.98 | likely_pathogenic | 0.9553 | pathogenic | 0.655 | Stabilizing | 0.809 | D | 0.839 | deleterious | None | None | None | None | N |
D/G | 0.9124 | likely_pathogenic | 0.86 | pathogenic | -0.47 | Destabilizing | 0.645 | D | 0.771 | deleterious | D | 0.645467282 | None | None | N |
D/H | 0.8141 | likely_pathogenic | 0.6853 | pathogenic | 0.305 | Stabilizing | 0.071 | N | 0.57 | neutral | D | 0.58994957 | None | None | N |
D/I | 0.9677 | likely_pathogenic | 0.932 | pathogenic | 1.101 | Stabilizing | 0.945 | D | 0.841 | deleterious | None | None | None | None | N |
D/K | 0.9724 | likely_pathogenic | 0.9484 | pathogenic | 0.027 | Stabilizing | 0.894 | D | 0.791 | deleterious | None | None | None | None | N |
D/L | 0.9675 | likely_pathogenic | 0.932 | pathogenic | 1.101 | Stabilizing | 0.894 | D | 0.836 | deleterious | None | None | None | None | N |
D/M | 0.9839 | likely_pathogenic | 0.9632 | pathogenic | 1.475 | Stabilizing | 0.995 | D | 0.82 | deleterious | None | None | None | None | N |
D/N | 0.602 | likely_pathogenic | 0.4954 | ambiguous | -0.757 | Destabilizing | 0.837 | D | 0.714 | prob.delet. | D | 0.585842045 | None | None | N |
D/P | 0.9947 | likely_pathogenic | 0.9893 | pathogenic | 0.749 | Stabilizing | 0.945 | D | 0.783 | deleterious | None | None | None | None | N |
D/Q | 0.9175 | likely_pathogenic | 0.8476 | pathogenic | -0.487 | Destabilizing | 0.894 | D | 0.743 | deleterious | None | None | None | None | N |
D/R | 0.9758 | likely_pathogenic | 0.9551 | pathogenic | 0.141 | Stabilizing | 0.894 | D | 0.838 | deleterious | None | None | None | None | N |
D/S | 0.7341 | likely_pathogenic | 0.6184 | pathogenic | -0.977 | Destabilizing | 0.707 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/T | 0.9325 | likely_pathogenic | 0.8812 | pathogenic | -0.591 | Destabilizing | 0.945 | D | 0.791 | deleterious | None | None | None | None | N |
D/V | 0.9134 | likely_pathogenic | 0.8393 | pathogenic | 0.749 | Stabilizing | 0.864 | D | 0.841 | deleterious | D | 0.645870891 | None | None | N |
D/W | 0.996 | likely_pathogenic | 0.991 | pathogenic | 0.827 | Stabilizing | 0.995 | D | 0.823 | deleterious | None | None | None | None | N |
D/Y | 0.8669 | likely_pathogenic | 0.7796 | pathogenic | 0.932 | Stabilizing | 0.125 | N | 0.643 | neutral | D | 0.629417561 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.