Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6081 | 18466;18467;18468 | chr2:178730159;178730158;178730157 | chr2:179594886;179594885;179594884 |
N2AB | 5764 | 17515;17516;17517 | chr2:178730159;178730158;178730157 | chr2:179594886;179594885;179594884 |
N2A | 4837 | 14734;14735;14736 | chr2:178730159;178730158;178730157 | chr2:179594886;179594885;179594884 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.08 | D | 0.254 | 0.241 | 0.18995819373 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0743 | likely_benign | 0.0736 | benign | -1.196 | Destabilizing | 0.08 | N | 0.254 | neutral | D | 0.527189578 | None | None | N |
T/C | 0.4204 | ambiguous | 0.379 | ambiguous | -0.659 | Destabilizing | 0.965 | D | 0.455 | neutral | None | None | None | None | N |
T/D | 0.2104 | likely_benign | 0.183 | benign | -0.07 | Destabilizing | 0.002 | N | 0.162 | neutral | None | None | None | None | N |
T/E | 0.2138 | likely_benign | 0.193 | benign | -0.043 | Destabilizing | 0.002 | N | 0.161 | neutral | None | None | None | None | N |
T/F | 0.1587 | likely_benign | 0.1527 | benign | -1.209 | Destabilizing | 0.818 | D | 0.572 | neutral | None | None | None | None | N |
T/G | 0.2348 | likely_benign | 0.2173 | benign | -1.473 | Destabilizing | 0.209 | N | 0.295 | neutral | None | None | None | None | N |
T/H | 0.1879 | likely_benign | 0.172 | benign | -1.605 | Destabilizing | 0.901 | D | 0.518 | neutral | None | None | None | None | N |
T/I | 0.0988 | likely_benign | 0.0946 | benign | -0.535 | Destabilizing | 0.003 | N | 0.213 | neutral | N | 0.516319223 | None | None | N |
T/K | 0.1909 | likely_benign | 0.176 | benign | -0.691 | Destabilizing | 0.209 | N | 0.357 | neutral | None | None | None | None | N |
T/L | 0.082 | likely_benign | 0.0798 | benign | -0.535 | Destabilizing | 0.209 | N | 0.341 | neutral | None | None | None | None | N |
T/M | 0.0856 | likely_benign | 0.0856 | benign | -0.199 | Destabilizing | 0.818 | D | 0.47 | neutral | None | None | None | None | N |
T/N | 0.0656 | likely_benign | 0.0653 | benign | -0.673 | Destabilizing | 0.001 | N | 0.144 | neutral | N | 0.480398495 | None | None | N |
T/P | 0.1361 | likely_benign | 0.128 | benign | -0.724 | Destabilizing | 0.662 | D | 0.449 | neutral | N | 0.497302578 | None | None | N |
T/Q | 0.1845 | likely_benign | 0.1699 | benign | -0.815 | Destabilizing | 0.047 | N | 0.199 | neutral | None | None | None | None | N |
T/R | 0.1517 | likely_benign | 0.145 | benign | -0.482 | Destabilizing | 0.561 | D | 0.449 | neutral | None | None | None | None | N |
T/S | 0.0856 | likely_benign | 0.0843 | benign | -1.081 | Destabilizing | 0.005 | N | 0.134 | neutral | N | 0.498560181 | None | None | N |
T/V | 0.1004 | likely_benign | 0.0961 | benign | -0.724 | Destabilizing | 0.209 | N | 0.313 | neutral | None | None | None | None | N |
T/W | 0.4571 | ambiguous | 0.4478 | ambiguous | -1.058 | Destabilizing | 0.991 | D | 0.523 | neutral | None | None | None | None | N |
T/Y | 0.175 | likely_benign | 0.1748 | benign | -0.85 | Destabilizing | 0.965 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.