Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6086 | 18481;18482;18483 | chr2:178730144;178730143;178730142 | chr2:179594871;179594870;179594869 |
N2AB | 5769 | 17530;17531;17532 | chr2:178730144;178730143;178730142 | chr2:179594871;179594870;179594869 |
N2A | 4842 | 14749;14750;14751 | chr2:178730144;178730143;178730142 | chr2:179594871;179594870;179594869 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1160746683 | -1.161 | 0.002 | N | 0.284 | 0.126 | 0.226586394389 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
L/I | rs1160746683 | -1.161 | 0.002 | N | 0.284 | 0.126 | 0.226586394389 | gnomAD-4.0.0 | 3.18523E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 1.43394E-05 | 0 |
L/V | None | None | 0.022 | N | 0.292 | 0.189 | 0.18274738541 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5372 | ambiguous | 0.5435 | ambiguous | -2.602 | Highly Destabilizing | 0.029 | N | 0.485 | neutral | None | None | None | None | N |
L/C | 0.7427 | likely_pathogenic | 0.7433 | pathogenic | -2.325 | Highly Destabilizing | 0.991 | D | 0.788 | deleterious | None | None | None | None | N |
L/D | 0.996 | likely_pathogenic | 0.9968 | pathogenic | -3.429 | Highly Destabilizing | 0.974 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.9801 | likely_pathogenic | 0.9838 | pathogenic | -3.23 | Highly Destabilizing | 0.974 | D | 0.802 | deleterious | None | None | None | None | N |
L/F | 0.4801 | ambiguous | 0.5254 | ambiguous | -1.454 | Destabilizing | 0.949 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/G | 0.9217 | likely_pathogenic | 0.9305 | pathogenic | -3.092 | Highly Destabilizing | 0.842 | D | 0.779 | deleterious | None | None | None | None | N |
L/H | 0.9422 | likely_pathogenic | 0.9564 | pathogenic | -2.477 | Highly Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
L/I | 0.0723 | likely_benign | 0.072 | benign | -1.183 | Destabilizing | 0.002 | N | 0.284 | neutral | N | 0.392278078 | None | None | N |
L/K | 0.9752 | likely_pathogenic | 0.9808 | pathogenic | -1.965 | Destabilizing | 0.974 | D | 0.787 | deleterious | None | None | None | None | N |
L/M | 0.2265 | likely_benign | 0.23 | benign | -1.457 | Destabilizing | 0.949 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/N | 0.9674 | likely_pathogenic | 0.9734 | pathogenic | -2.371 | Highly Destabilizing | 0.991 | D | 0.831 | deleterious | None | None | None | None | N |
L/P | 0.9881 | likely_pathogenic | 0.9889 | pathogenic | -1.639 | Destabilizing | 0.966 | D | 0.828 | deleterious | N | 0.436743719 | None | None | N |
L/Q | 0.9155 | likely_pathogenic | 0.9338 | pathogenic | -2.273 | Highly Destabilizing | 0.989 | D | 0.817 | deleterious | N | 0.496002666 | None | None | N |
L/R | 0.9444 | likely_pathogenic | 0.9573 | pathogenic | -1.647 | Destabilizing | 0.966 | D | 0.813 | deleterious | N | 0.496002666 | None | None | N |
L/S | 0.8857 | likely_pathogenic | 0.8999 | pathogenic | -2.961 | Highly Destabilizing | 0.728 | D | 0.761 | deleterious | None | None | None | None | N |
L/T | 0.7373 | likely_pathogenic | 0.7488 | pathogenic | -2.63 | Highly Destabilizing | 0.842 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/V | 0.0858 | likely_benign | 0.0835 | benign | -1.639 | Destabilizing | 0.022 | N | 0.292 | neutral | N | 0.307155107 | None | None | N |
L/W | 0.8966 | likely_pathogenic | 0.929 | pathogenic | -1.849 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
L/Y | 0.8908 | likely_pathogenic | 0.9149 | pathogenic | -1.634 | Destabilizing | 0.991 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.