Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6087 | 18484;18485;18486 | chr2:178730141;178730140;178730139 | chr2:179594868;179594867;179594866 |
N2AB | 5770 | 17533;17534;17535 | chr2:178730141;178730140;178730139 | chr2:179594868;179594867;179594866 |
N2A | 4843 | 14752;14753;14754 | chr2:178730141;178730140;178730139 | chr2:179594868;179594867;179594866 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1270956493 | None | 0.684 | N | 0.429 | 0.283 | 0.270001397563 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs1270956493 | None | 0.684 | N | 0.429 | 0.283 | 0.270001397563 | gnomAD-4.0.0 | 6.59457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47258E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1046 | likely_benign | 0.0967 | benign | -0.573 | Destabilizing | 0.016 | N | 0.114 | neutral | None | None | None | None | N |
S/C | 0.1861 | likely_benign | 0.1549 | benign | -0.667 | Destabilizing | 0.994 | D | 0.5 | neutral | D | 0.522474405 | None | None | N |
S/D | 0.5099 | ambiguous | 0.5584 | ambiguous | -1.214 | Destabilizing | 0.742 | D | 0.407 | neutral | None | None | None | None | N |
S/E | 0.5637 | ambiguous | 0.5602 | ambiguous | -1.21 | Destabilizing | 0.373 | N | 0.38 | neutral | None | None | None | None | N |
S/F | 0.228 | likely_benign | 0.213 | benign | -0.861 | Destabilizing | 0.953 | D | 0.621 | neutral | None | None | None | None | N |
S/G | 0.1352 | likely_benign | 0.1499 | benign | -0.805 | Destabilizing | 0.472 | N | 0.377 | neutral | N | 0.485999179 | None | None | N |
S/H | 0.2868 | likely_benign | 0.3233 | benign | -1.335 | Destabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
S/I | 0.1715 | likely_benign | 0.1807 | benign | -0.061 | Destabilizing | 0.884 | D | 0.611 | neutral | N | 0.503863171 | None | None | N |
S/K | 0.6549 | likely_pathogenic | 0.6733 | pathogenic | -0.791 | Destabilizing | 0.373 | N | 0.379 | neutral | None | None | None | None | N |
S/L | 0.1337 | likely_benign | 0.1245 | benign | -0.061 | Destabilizing | 0.59 | D | 0.589 | neutral | None | None | None | None | N |
S/M | 0.2073 | likely_benign | 0.2029 | benign | 0.276 | Stabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
S/N | 0.1306 | likely_benign | 0.1606 | benign | -0.947 | Destabilizing | 0.684 | D | 0.429 | neutral | N | 0.501292277 | None | None | N |
S/P | 0.9484 | likely_pathogenic | 0.9682 | pathogenic | -0.199 | Destabilizing | 0.854 | D | 0.513 | neutral | None | None | None | None | N |
S/Q | 0.4233 | ambiguous | 0.4436 | ambiguous | -1.191 | Destabilizing | 0.101 | N | 0.119 | neutral | None | None | None | None | N |
S/R | 0.5376 | ambiguous | 0.5731 | pathogenic | -0.585 | Destabilizing | 0.028 | N | 0.323 | neutral | N | 0.48333938 | None | None | N |
S/T | 0.0685 | likely_benign | 0.0684 | benign | -0.823 | Destabilizing | 0.007 | N | 0.139 | neutral | N | 0.505350081 | None | None | N |
S/V | 0.1895 | likely_benign | 0.188 | benign | -0.199 | Destabilizing | 0.59 | D | 0.61 | neutral | None | None | None | None | N |
S/W | 0.3853 | ambiguous | 0.4082 | ambiguous | -0.899 | Destabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | N |
S/Y | 0.2249 | likely_benign | 0.2248 | benign | -0.578 | Destabilizing | 0.984 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.