Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6088 | 18487;18488;18489 | chr2:178730138;178730137;178730136 | chr2:179594865;179594864;179594863 |
N2AB | 5771 | 17536;17537;17538 | chr2:178730138;178730137;178730136 | chr2:179594865;179594864;179594863 |
N2A | 4844 | 14755;14756;14757 | chr2:178730138;178730137;178730136 | chr2:179594865;179594864;179594863 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs748182054 | -0.088 | 1.0 | D | 0.744 | 0.515 | 0.227260227426 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 3.44828E-03 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9888 | likely_pathogenic | 0.9847 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
N/C | 0.9585 | likely_pathogenic | 0.9378 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
N/D | 0.9369 | likely_pathogenic | 0.9257 | pathogenic | -1.637 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.515721277 | None | None | N |
N/E | 0.9968 | likely_pathogenic | 0.9963 | pathogenic | -1.58 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/F | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
N/G | 0.9566 | likely_pathogenic | 0.9528 | pathogenic | -0.445 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | N |
N/H | 0.9544 | likely_pathogenic | 0.9473 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.531965881 | None | None | N |
N/I | 0.9935 | likely_pathogenic | 0.9891 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.54374026 | None | None | N |
N/K | 0.9968 | likely_pathogenic | 0.9962 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.744 | deleterious | D | 0.542979792 | None | None | N |
N/L | 0.98 | likely_pathogenic | 0.9719 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
N/M | 0.9915 | likely_pathogenic | 0.9876 | pathogenic | 0.983 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
N/P | 0.9942 | likely_pathogenic | 0.9938 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
N/Q | 0.9957 | likely_pathogenic | 0.9953 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
N/R | 0.994 | likely_pathogenic | 0.9936 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/S | 0.5362 | ambiguous | 0.4972 | ambiguous | -0.508 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.489525946 | None | None | N |
N/T | 0.8997 | likely_pathogenic | 0.861 | pathogenic | -0.311 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.515974767 | None | None | N |
N/V | 0.9891 | likely_pathogenic | 0.9827 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/W | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/Y | 0.9888 | likely_pathogenic | 0.9853 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.745 | deleterious | D | 0.543486771 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.