Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6092 | 18499;18500;18501 | chr2:178730126;178730125;178730124 | chr2:179594853;179594852;179594851 |
N2AB | 5775 | 17548;17549;17550 | chr2:178730126;178730125;178730124 | chr2:179594853;179594852;179594851 |
N2A | 4848 | 14767;14768;14769 | chr2:178730126;178730125;178730124 | chr2:179594853;179594852;179594851 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1257068599 | -0.447 | None | N | 0.102 | 0.053 | 0.110078149338 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 1E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1257068599 | -0.447 | None | N | 0.102 | 0.053 | 0.110078149338 | gnomAD-4.0.0 | 1.5929E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02718E-05 |
T/R | None | None | 0.171 | N | 0.481 | 0.122 | 0.302459207581 | gnomAD-4.0.0 | 1.59304E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0823 | likely_benign | 0.0832 | benign | -0.528 | Destabilizing | None | N | 0.102 | neutral | N | 0.448363435 | None | None | I |
T/C | 0.4388 | ambiguous | 0.4175 | ambiguous | -0.262 | Destabilizing | 0.628 | D | 0.487 | neutral | None | None | None | None | I |
T/D | 0.3753 | ambiguous | 0.3516 | ambiguous | -0.071 | Destabilizing | 0.072 | N | 0.475 | neutral | None | None | None | None | I |
T/E | 0.2946 | likely_benign | 0.2744 | benign | -0.153 | Destabilizing | 0.072 | N | 0.408 | neutral | None | None | None | None | I |
T/F | 0.1717 | likely_benign | 0.1712 | benign | -0.99 | Destabilizing | 0.12 | N | 0.545 | neutral | None | None | None | None | I |
T/G | 0.2671 | likely_benign | 0.2644 | benign | -0.662 | Destabilizing | 0.016 | N | 0.496 | neutral | None | None | None | None | I |
T/H | 0.2249 | likely_benign | 0.2204 | benign | -0.986 | Destabilizing | 0.676 | D | 0.538 | neutral | None | None | None | None | I |
T/I | 0.1259 | likely_benign | 0.1139 | benign | -0.288 | Destabilizing | None | N | 0.269 | neutral | N | 0.452713249 | None | None | I |
T/K | 0.189 | likely_benign | 0.1722 | benign | -0.468 | Destabilizing | 0.029 | N | 0.409 | neutral | N | 0.401780209 | None | None | I |
T/L | 0.0961 | likely_benign | 0.0895 | benign | -0.288 | Destabilizing | None | N | 0.203 | neutral | None | None | None | None | I |
T/M | 0.0787 | likely_benign | 0.0789 | benign | 0.064 | Stabilizing | 0.12 | N | 0.486 | neutral | None | None | None | None | I |
T/N | 0.106 | likely_benign | 0.1039 | benign | -0.202 | Destabilizing | 0.038 | N | 0.375 | neutral | None | None | None | None | I |
T/P | 0.2876 | likely_benign | 0.304 | benign | -0.34 | Destabilizing | 0.295 | N | 0.469 | neutral | N | 0.505603584 | None | None | I |
T/Q | 0.207 | likely_benign | 0.2036 | benign | -0.512 | Destabilizing | 0.214 | N | 0.494 | neutral | None | None | None | None | I |
T/R | 0.1709 | likely_benign | 0.1601 | benign | -0.124 | Destabilizing | 0.171 | N | 0.481 | neutral | N | 0.455444123 | None | None | I |
T/S | 0.0944 | likely_benign | 0.0972 | benign | -0.424 | Destabilizing | None | N | 0.112 | neutral | N | 0.375943189 | None | None | I |
T/V | 0.1043 | likely_benign | 0.1012 | benign | -0.34 | Destabilizing | 0.006 | N | 0.329 | neutral | None | None | None | None | I |
T/W | 0.5159 | ambiguous | 0.5214 | ambiguous | -0.94 | Destabilizing | 0.864 | D | 0.563 | neutral | None | None | None | None | I |
T/Y | 0.2307 | likely_benign | 0.2279 | benign | -0.687 | Destabilizing | 0.356 | N | 0.556 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.