Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6094 | 18505;18506;18507 | chr2:178730120;178730119;178730118 | chr2:179594847;179594846;179594845 |
N2AB | 5777 | 17554;17555;17556 | chr2:178730120;178730119;178730118 | chr2:179594847;179594846;179594845 |
N2A | 4850 | 14773;14774;14775 | chr2:178730120;178730119;178730118 | chr2:179594847;179594846;179594845 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1315540030 | -0.069 | 0.317 | N | 0.519 | 0.311 | 0.386882687439 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/I | rs1315540030 | -0.069 | 0.317 | N | 0.519 | 0.311 | 0.386882687439 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1315540030 | -0.069 | 0.317 | N | 0.519 | 0.311 | 0.386882687439 | gnomAD-4.0.0 | 2.02997E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0792 | likely_benign | 0.082 | benign | -0.877 | Destabilizing | None | N | 0.221 | neutral | N | 0.477072975 | None | None | N |
T/C | 0.485 | ambiguous | 0.4346 | ambiguous | -0.501 | Destabilizing | 0.824 | D | 0.509 | neutral | None | None | None | None | N |
T/D | 0.31 | likely_benign | 0.332 | benign | 0.287 | Stabilizing | 0.081 | N | 0.457 | neutral | None | None | None | None | N |
T/E | 0.2668 | likely_benign | 0.2621 | benign | 0.308 | Stabilizing | 0.081 | N | 0.438 | neutral | None | None | None | None | N |
T/F | 0.1891 | likely_benign | 0.1812 | benign | -0.981 | Destabilizing | 0.555 | D | 0.561 | neutral | None | None | None | None | N |
T/G | 0.2647 | likely_benign | 0.2804 | benign | -1.135 | Destabilizing | 0.035 | N | 0.49 | neutral | None | None | None | None | N |
T/H | 0.2536 | likely_benign | 0.2407 | benign | -1.258 | Destabilizing | 0.824 | D | 0.552 | neutral | None | None | None | None | N |
T/I | 0.1418 | likely_benign | 0.1318 | benign | -0.281 | Destabilizing | 0.317 | N | 0.519 | neutral | N | 0.489156838 | None | None | N |
T/K | 0.2224 | likely_benign | 0.2093 | benign | -0.464 | Destabilizing | 0.081 | N | 0.44 | neutral | None | None | None | None | N |
T/L | 0.1092 | likely_benign | 0.1103 | benign | -0.281 | Destabilizing | 0.081 | N | 0.465 | neutral | None | None | None | None | N |
T/M | 0.1064 | likely_benign | 0.1013 | benign | -0.18 | Destabilizing | 0.791 | D | 0.518 | neutral | None | None | None | None | N |
T/N | 0.109 | likely_benign | 0.1172 | benign | -0.47 | Destabilizing | 0.062 | N | 0.449 | neutral | N | 0.472032515 | None | None | N |
T/P | 0.2038 | likely_benign | 0.2637 | benign | -0.448 | Destabilizing | 0.317 | N | 0.525 | neutral | N | 0.507742599 | None | None | N |
T/Q | 0.2188 | likely_benign | 0.2152 | benign | -0.542 | Destabilizing | 0.38 | N | 0.537 | neutral | None | None | None | None | N |
T/R | 0.1866 | likely_benign | 0.1776 | benign | -0.3 | Destabilizing | 0.38 | N | 0.529 | neutral | None | None | None | None | N |
T/S | 0.0866 | likely_benign | 0.0908 | benign | -0.832 | Destabilizing | None | N | 0.251 | neutral | N | 0.384373458 | None | None | N |
T/V | 0.1162 | likely_benign | 0.1124 | benign | -0.448 | Destabilizing | 0.081 | N | 0.474 | neutral | None | None | None | None | N |
T/W | 0.5727 | likely_pathogenic | 0.5632 | ambiguous | -0.914 | Destabilizing | 0.935 | D | 0.611 | neutral | None | None | None | None | N |
T/Y | 0.2315 | likely_benign | 0.2218 | benign | -0.66 | Destabilizing | 0.555 | D | 0.556 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.