Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6105 | 18538;18539;18540 | chr2:178729940;178729939;178729938 | chr2:179594667;179594666;179594665 |
N2AB | 5788 | 17587;17588;17589 | chr2:178729940;178729939;178729938 | chr2:179594667;179594666;179594665 |
N2A | 4861 | 14806;14807;14808 | chr2:178729940;178729939;178729938 | chr2:179594667;179594666;179594665 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.897 | 0.769 | 0.948956264298 | gnomAD-4.0.0 | 1.59812E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86615E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3516 | ambiguous | 0.3623 | ambiguous | -1.839 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.627756663 | None | None | N |
P/C | 0.9295 | likely_pathogenic | 0.9411 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/D | 0.9964 | likely_pathogenic | 0.9969 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/E | 0.9828 | likely_pathogenic | 0.9852 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
P/F | 0.9906 | likely_pathogenic | 0.9945 | pathogenic | -1.446 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/G | 0.9454 | likely_pathogenic | 0.9516 | pathogenic | -2.202 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
P/H | 0.9809 | likely_pathogenic | 0.9854 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.670524962 | None | None | N |
P/I | 0.8388 | likely_pathogenic | 0.8933 | pathogenic | -0.909 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/K | 0.9903 | likely_pathogenic | 0.9919 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/L | 0.6664 | likely_pathogenic | 0.7534 | pathogenic | -0.909 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.669919549 | None | None | N |
P/M | 0.9481 | likely_pathogenic | 0.964 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/N | 0.9913 | likely_pathogenic | 0.993 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/Q | 0.9599 | likely_pathogenic | 0.9664 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
P/R | 0.961 | likely_pathogenic | 0.968 | pathogenic | -0.976 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.670323157 | None | None | N |
P/S | 0.8399 | likely_pathogenic | 0.8617 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.644583242 | None | None | N |
P/T | 0.816 | likely_pathogenic | 0.8424 | pathogenic | -1.806 | Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.670323157 | None | None | N |
P/V | 0.6822 | likely_pathogenic | 0.7559 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/W | 0.9975 | likely_pathogenic | 0.9984 | pathogenic | -1.685 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/Y | 0.994 | likely_pathogenic | 0.9962 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.