Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6111 | 18556;18557;18558 | chr2:178729922;178729921;178729920 | chr2:179594649;179594648;179594647 |
N2AB | 5794 | 17605;17606;17607 | chr2:178729922;178729921;178729920 | chr2:179594649;179594648;179594647 |
N2A | 4867 | 14824;14825;14826 | chr2:178729922;178729921;178729920 | chr2:179594649;179594648;179594647 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs753241275 | -1.411 | 1.0 | N | 0.821 | 0.513 | 0.507213507908 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/H | rs753241275 | -1.411 | 1.0 | N | 0.821 | 0.513 | 0.507213507908 | gnomAD-4.0.0 | 1.59376E-06 | None | None | None | None | N | None | 0 | 2.29442E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2257 | likely_benign | 0.2071 | benign | -1.596 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.494512696 | None | None | N |
P/C | 0.8718 | likely_pathogenic | 0.8411 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
P/D | 0.9246 | likely_pathogenic | 0.8886 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/E | 0.8092 | likely_pathogenic | 0.7605 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/F | 0.8291 | likely_pathogenic | 0.7977 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/G | 0.7503 | likely_pathogenic | 0.7102 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/H | 0.7394 | likely_pathogenic | 0.6743 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.504173934 | None | None | N |
P/I | 0.4871 | ambiguous | 0.4768 | ambiguous | -0.496 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/K | 0.8656 | likely_pathogenic | 0.8156 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/L | 0.2016 | likely_benign | 0.2313 | benign | -0.496 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.408020243 | None | None | N |
P/M | 0.557 | ambiguous | 0.5482 | ambiguous | -0.395 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/N | 0.8565 | likely_pathogenic | 0.8118 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
P/Q | 0.6413 | likely_pathogenic | 0.5861 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/R | 0.7378 | likely_pathogenic | 0.6837 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.52177121 | None | None | N |
P/S | 0.5861 | likely_pathogenic | 0.5166 | ambiguous | -1.879 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.503413466 | None | None | N |
P/T | 0.3693 | ambiguous | 0.3232 | benign | -1.653 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.510161415 | None | None | N |
P/V | 0.3556 | ambiguous | 0.3448 | ambiguous | -0.83 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/W | 0.948 | likely_pathogenic | 0.9333 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
P/Y | 0.8694 | likely_pathogenic | 0.8192 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.