Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6112 | 18559;18560;18561 | chr2:178729919;178729918;178729917 | chr2:179594646;179594645;179594644 |
N2AB | 5795 | 17608;17609;17610 | chr2:178729919;178729918;178729917 | chr2:179594646;179594645;179594644 |
N2A | 4868 | 14827;14828;14829 | chr2:178729919;178729918;178729917 | chr2:179594646;179594645;179594644 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.625 | N | 0.264 | 0.153 | 0.272205846399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0851 | likely_benign | 0.0904 | benign | -0.126 | Destabilizing | 0.029 | N | 0.077 | neutral | None | None | None | None | N |
S/C | 0.2217 | likely_benign | 0.205 | benign | -0.453 | Destabilizing | 0.997 | D | 0.379 | neutral | N | 0.496812507 | None | None | N |
S/D | 0.1898 | likely_benign | 0.2314 | benign | 0.157 | Stabilizing | 0.728 | D | 0.254 | neutral | None | None | None | None | N |
S/E | 0.2674 | likely_benign | 0.3351 | benign | 0.091 | Stabilizing | 0.067 | N | 0.125 | neutral | None | None | None | None | N |
S/F | 0.1537 | likely_benign | 0.174 | benign | -0.776 | Destabilizing | 0.974 | D | 0.451 | neutral | None | None | None | None | N |
S/G | 0.1018 | likely_benign | 0.1132 | benign | -0.235 | Destabilizing | 0.625 | D | 0.264 | neutral | N | 0.504142146 | None | None | N |
S/H | 0.2494 | likely_benign | 0.2829 | benign | -0.614 | Destabilizing | 0.991 | D | 0.377 | neutral | None | None | None | None | N |
S/I | 0.1313 | likely_benign | 0.1445 | benign | 0.027 | Stabilizing | 0.934 | D | 0.416 | neutral | N | 0.506201017 | None | None | N |
S/K | 0.4002 | ambiguous | 0.4625 | ambiguous | -0.382 | Destabilizing | 0.842 | D | 0.255 | neutral | None | None | None | None | N |
S/L | 0.0907 | likely_benign | 0.097 | benign | 0.027 | Stabilizing | 0.728 | D | 0.367 | neutral | None | None | None | None | N |
S/M | 0.2045 | likely_benign | 0.2206 | benign | -0.201 | Destabilizing | 0.991 | D | 0.377 | neutral | None | None | None | None | N |
S/N | 0.1033 | likely_benign | 0.1106 | benign | -0.282 | Destabilizing | 0.801 | D | 0.333 | neutral | N | 0.512510914 | None | None | N |
S/P | 0.1111 | likely_benign | 0.1243 | benign | 0.005 | Stabilizing | 0.974 | D | 0.382 | neutral | None | None | None | None | N |
S/Q | 0.3063 | likely_benign | 0.3618 | ambiguous | -0.395 | Destabilizing | 0.949 | D | 0.335 | neutral | None | None | None | None | N |
S/R | 0.3447 | ambiguous | 0.407 | ambiguous | -0.225 | Destabilizing | 0.934 | D | 0.382 | neutral | N | 0.459041788 | None | None | N |
S/T | 0.088 | likely_benign | 0.0921 | benign | -0.283 | Destabilizing | 0.051 | N | 0.104 | neutral | N | 0.478667699 | None | None | N |
S/V | 0.1502 | likely_benign | 0.1647 | benign | 0.005 | Stabilizing | 0.728 | D | 0.377 | neutral | None | None | None | None | N |
S/W | 0.2636 | likely_benign | 0.3096 | benign | -0.908 | Destabilizing | 0.998 | D | 0.504 | neutral | None | None | None | None | N |
S/Y | 0.1543 | likely_benign | 0.1688 | benign | -0.552 | Destabilizing | 0.991 | D | 0.448 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.