Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6114 | 18565;18566;18567 | chr2:178729913;178729912;178729911 | chr2:179594640;179594639;179594638 |
N2AB | 5797 | 17614;17615;17616 | chr2:178729913;178729912;178729911 | chr2:179594640;179594639;179594638 |
N2A | 4870 | 14833;14834;14835 | chr2:178729913;178729912;178729911 | chr2:179594640;179594639;179594638 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.012 | N | 0.129 | 0.174 | 0.499535901811 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/D | None | None | 0.966 | D | 0.415 | 0.461 | 0.811599919723 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs762371825 | -0.115 | 0.051 | N | 0.189 | 0.137 | 0.403609169532 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/I | rs762371825 | -0.115 | 0.051 | N | 0.189 | 0.137 | 0.403609169532 | gnomAD-4.0.0 | 9.58383E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16956E-05 | 0 | 1.65804E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1253 | likely_benign | 0.1455 | benign | -1.071 | Destabilizing | 0.012 | N | 0.129 | neutral | N | 0.509262752 | None | None | I |
V/C | 0.6968 | likely_pathogenic | 0.6926 | pathogenic | -0.961 | Destabilizing | 0.993 | D | 0.279 | neutral | None | None | None | None | I |
V/D | 0.1758 | likely_benign | 0.2019 | benign | -0.51 | Destabilizing | 0.966 | D | 0.415 | neutral | D | 0.534777272 | None | None | I |
V/E | 0.1599 | likely_benign | 0.1782 | benign | -0.46 | Destabilizing | 0.949 | D | 0.386 | neutral | None | None | None | None | I |
V/F | 0.1014 | likely_benign | 0.1139 | benign | -0.611 | Destabilizing | 0.012 | N | 0.177 | neutral | N | 0.504454365 | None | None | I |
V/G | 0.1552 | likely_benign | 0.1751 | benign | -1.403 | Destabilizing | 0.669 | D | 0.432 | neutral | N | 0.505578827 | None | None | I |
V/H | 0.3628 | ambiguous | 0.4013 | ambiguous | -0.8 | Destabilizing | 0.998 | D | 0.369 | neutral | None | None | None | None | I |
V/I | 0.0757 | likely_benign | 0.0768 | benign | -0.253 | Destabilizing | 0.051 | N | 0.189 | neutral | N | 0.478131768 | None | None | I |
V/K | 0.2311 | likely_benign | 0.2532 | benign | -0.925 | Destabilizing | 0.949 | D | 0.395 | neutral | None | None | None | None | I |
V/L | 0.1299 | likely_benign | 0.1358 | benign | -0.253 | Destabilizing | 0.005 | N | 0.097 | neutral | N | 0.489367482 | None | None | I |
V/M | 0.11 | likely_benign | 0.1193 | benign | -0.477 | Destabilizing | 0.325 | N | 0.215 | neutral | None | None | None | None | I |
V/N | 0.1581 | likely_benign | 0.1818 | benign | -0.892 | Destabilizing | 0.974 | D | 0.391 | neutral | None | None | None | None | I |
V/P | 0.4495 | ambiguous | 0.4558 | ambiguous | -0.491 | Destabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | I |
V/Q | 0.2026 | likely_benign | 0.2268 | benign | -0.898 | Destabilizing | 0.974 | D | 0.354 | neutral | None | None | None | None | I |
V/R | 0.2064 | likely_benign | 0.2252 | benign | -0.609 | Destabilizing | 0.974 | D | 0.401 | neutral | None | None | None | None | I |
V/S | 0.1255 | likely_benign | 0.1424 | benign | -1.464 | Destabilizing | 0.728 | D | 0.355 | neutral | None | None | None | None | I |
V/T | 0.13 | likely_benign | 0.1467 | benign | -1.279 | Destabilizing | 0.842 | D | 0.201 | neutral | None | None | None | None | I |
V/W | 0.6445 | likely_pathogenic | 0.6738 | pathogenic | -0.806 | Destabilizing | 0.998 | D | 0.383 | neutral | None | None | None | None | I |
V/Y | 0.3491 | ambiguous | 0.3646 | ambiguous | -0.484 | Destabilizing | 0.904 | D | 0.34 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.