Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6119 | 18580;18581;18582 | chr2:178729898;178729897;178729896 | chr2:179594625;179594624;179594623 |
N2AB | 5802 | 17629;17630;17631 | chr2:178729898;178729897;178729896 | chr2:179594625;179594624;179594623 |
N2A | 4875 | 14848;14849;14850 | chr2:178729898;178729897;178729896 | chr2:179594625;179594624;179594623 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.042 | N | 0.278 | 0.136 | 0.214338557667 | gnomAD-4.0.0 | 4.77681E-06 | None | None | None | None | I | None | 0 | 2.29001E-05 | None | 0 | 0 | None | 1.88437E-05 | 0 | 2.8593E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1344 | likely_benign | 0.14 | benign | -0.528 | Destabilizing | 0.025 | N | 0.303 | neutral | None | None | None | None | I |
N/C | 0.2804 | likely_benign | 0.282 | benign | 0.247 | Stabilizing | 0.958 | D | 0.385 | neutral | None | None | None | None | I |
N/D | 0.0976 | likely_benign | 0.0961 | benign | 0.057 | Stabilizing | 0.042 | N | 0.257 | neutral | N | 0.429508315 | None | None | I |
N/E | 0.1268 | likely_benign | 0.1252 | benign | 0.062 | Stabilizing | None | N | 0.131 | neutral | None | None | None | None | I |
N/F | 0.4257 | ambiguous | 0.429 | ambiguous | -0.658 | Destabilizing | 0.497 | N | 0.457 | neutral | None | None | None | None | I |
N/G | 0.1987 | likely_benign | 0.2071 | benign | -0.766 | Destabilizing | 0.104 | N | 0.245 | neutral | None | None | None | None | I |
N/H | 0.0875 | likely_benign | 0.0908 | benign | -0.681 | Destabilizing | 0.602 | D | 0.254 | neutral | N | 0.489826055 | None | None | I |
N/I | 0.1638 | likely_benign | 0.1548 | benign | 0.027 | Stabilizing | 0.096 | N | 0.457 | neutral | N | 0.432585906 | None | None | I |
N/K | 0.0906 | likely_benign | 0.0897 | benign | -0.034 | Destabilizing | None | N | 0.083 | neutral | N | 0.409421044 | None | None | I |
N/L | 0.166 | likely_benign | 0.1643 | benign | 0.027 | Stabilizing | None | N | 0.17 | neutral | None | None | None | None | I |
N/M | 0.221 | likely_benign | 0.2238 | benign | 0.406 | Stabilizing | 0.497 | N | 0.407 | neutral | None | None | None | None | I |
N/P | 0.2464 | likely_benign | 0.248 | benign | -0.129 | Destabilizing | None | N | 0.1 | neutral | None | None | None | None | I |
N/Q | 0.136 | likely_benign | 0.1453 | benign | -0.527 | Destabilizing | 0.124 | N | 0.214 | neutral | None | None | None | None | I |
N/R | 0.1194 | likely_benign | 0.1237 | benign | None | Stabilizing | 0.055 | N | 0.209 | neutral | None | None | None | None | I |
N/S | 0.0809 | likely_benign | 0.0816 | benign | -0.389 | Destabilizing | 0.042 | N | 0.278 | neutral | N | 0.440570671 | None | None | I |
N/T | 0.1108 | likely_benign | 0.1098 | benign | -0.217 | Destabilizing | 0.081 | N | 0.251 | neutral | N | 0.444341694 | None | None | I |
N/V | 0.1643 | likely_benign | 0.1598 | benign | -0.129 | Destabilizing | 0.055 | N | 0.359 | neutral | None | None | None | None | I |
N/W | 0.5658 | likely_pathogenic | 0.5777 | pathogenic | -0.533 | Destabilizing | 0.958 | D | 0.409 | neutral | None | None | None | None | I |
N/Y | 0.1238 | likely_benign | 0.1283 | benign | -0.31 | Destabilizing | 0.822 | D | 0.454 | neutral | N | 0.46783463 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.