Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6120 | 18583;18584;18585 | chr2:178729895;178729894;178729893 | chr2:179594622;179594621;179594620 |
N2AB | 5803 | 17632;17633;17634 | chr2:178729895;178729894;178729893 | chr2:179594622;179594621;179594620 |
N2A | 4876 | 14851;14852;14853 | chr2:178729895;178729894;178729893 | chr2:179594622;179594621;179594620 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs764816850 | -0.357 | 0.997 | D | 0.684 | 0.74 | 0.673390244647 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.80584E-04 | None | 0 | None | 0 | 0 | 0 |
G/A | rs764816850 | -0.357 | 0.997 | D | 0.684 | 0.74 | 0.673390244647 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93199E-04 | None | 0 | 0 | 0 | 0 | 0 |
G/A | rs764816850 | -0.357 | 0.997 | D | 0.684 | 0.74 | 0.673390244647 | gnomAD-4.0.0 | 1.53814E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.91687E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2719 | likely_benign | 0.2926 | benign | -0.313 | Destabilizing | 0.997 | D | 0.684 | prob.neutral | D | 0.616861028 | None | None | I |
G/C | 0.4452 | ambiguous | 0.4685 | ambiguous | -0.915 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
G/D | 0.1982 | likely_benign | 0.2084 | benign | -0.514 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
G/E | 0.2392 | likely_benign | 0.2561 | benign | -0.681 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.584570499 | None | None | I |
G/F | 0.6577 | likely_pathogenic | 0.6715 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
G/H | 0.3627 | ambiguous | 0.4087 | ambiguous | -0.51 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/I | 0.5382 | ambiguous | 0.5857 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/K | 0.3734 | ambiguous | 0.3943 | ambiguous | -0.708 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
G/L | 0.58 | likely_pathogenic | 0.6009 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/M | 0.6312 | likely_pathogenic | 0.6446 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/N | 0.2437 | likely_benign | 0.2631 | benign | -0.413 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
G/P | 0.9377 | likely_pathogenic | 0.9437 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/Q | 0.2853 | likely_benign | 0.3243 | benign | -0.713 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
G/R | 0.2415 | likely_benign | 0.274 | benign | -0.271 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.63842198 | None | None | I |
G/S | 0.1167 | likely_benign | 0.1345 | benign | -0.567 | Destabilizing | 0.986 | D | 0.583 | neutral | None | None | None | None | I |
G/T | 0.3085 | likely_benign | 0.3237 | benign | -0.664 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
G/V | 0.4601 | ambiguous | 0.5002 | ambiguous | -0.402 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.629105033 | None | None | I |
G/W | 0.4809 | ambiguous | 0.4804 | ambiguous | -1.195 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/Y | 0.4833 | ambiguous | 0.5255 | ambiguous | -0.851 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.