Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6126 | 18601;18602;18603 | chr2:178729877;178729876;178729875 | chr2:179594604;179594603;179594602 |
N2AB | 5809 | 17650;17651;17652 | chr2:178729877;178729876;178729875 | chr2:179594604;179594603;179594602 |
N2A | 4882 | 14869;14870;14871 | chr2:178729877;178729876;178729875 | chr2:179594604;179594603;179594602 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1328808708 | -0.906 | 0.822 | N | 0.513 | 0.418 | 0.534719010399 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 2.32585E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1328808708 | -0.906 | 0.822 | N | 0.513 | 0.418 | 0.534719010399 | gnomAD-4.0.0 | 7.52765E-06 | None | None | None | None | N | None | 0 | 1.79083E-04 | None | 0 | 0 | None | 0 | 0 | 8.99528E-07 | 0 | 3.31444E-05 |
E/G | rs1328808708 | None | 0.822 | N | 0.629 | 0.591 | 0.634345301216 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1328808708 | None | 0.822 | N | 0.629 | 0.591 | 0.634345301216 | gnomAD-4.0.0 | 5.57816E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.62893E-06 | 0 | 0 |
E/Q | rs1332146833 | -0.704 | 0.126 | N | 0.367 | 0.187 | 0.264081493735 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/Q | rs1332146833 | -0.704 | 0.126 | N | 0.367 | 0.187 | 0.264081493735 | gnomAD-4.0.0 | 3.18387E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71772E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1783 | likely_benign | 0.1876 | benign | -0.736 | Destabilizing | 0.822 | D | 0.513 | neutral | N | 0.488721431 | None | None | N |
E/C | 0.8703 | likely_pathogenic | 0.8904 | pathogenic | -0.302 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
E/D | 0.234 | likely_benign | 0.2446 | benign | -1.081 | Destabilizing | 0.014 | N | 0.399 | neutral | D | 0.52218919 | None | None | N |
E/F | 0.7434 | likely_pathogenic | 0.7914 | pathogenic | -0.481 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/G | 0.246 | likely_benign | 0.2767 | benign | -1.064 | Destabilizing | 0.822 | D | 0.629 | neutral | N | 0.510650801 | None | None | N |
E/H | 0.3911 | ambiguous | 0.4364 | ambiguous | -0.806 | Destabilizing | 0.994 | D | 0.613 | neutral | None | None | None | None | N |
E/I | 0.3486 | ambiguous | 0.379 | ambiguous | 0.144 | Stabilizing | 0.978 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/K | 0.1395 | likely_benign | 0.1544 | benign | -0.383 | Destabilizing | 0.698 | D | 0.433 | neutral | N | 0.485238711 | None | None | N |
E/L | 0.4095 | ambiguous | 0.4585 | ambiguous | 0.144 | Stabilizing | 0.956 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/M | 0.4692 | ambiguous | 0.5102 | ambiguous | 0.57 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/N | 0.3375 | likely_benign | 0.3639 | ambiguous | -0.755 | Destabilizing | 0.915 | D | 0.584 | neutral | None | None | None | None | N |
E/P | 0.8361 | likely_pathogenic | 0.8415 | pathogenic | -0.128 | Destabilizing | 0.978 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.105 | likely_benign | 0.1111 | benign | -0.67 | Destabilizing | 0.126 | N | 0.367 | neutral | N | 0.514300425 | None | None | N |
E/R | 0.2178 | likely_benign | 0.2502 | benign | -0.246 | Destabilizing | 0.915 | D | 0.58 | neutral | None | None | None | None | N |
E/S | 0.2115 | likely_benign | 0.2234 | benign | -1.04 | Destabilizing | 0.86 | D | 0.465 | neutral | None | None | None | None | N |
E/T | 0.2055 | likely_benign | 0.2157 | benign | -0.77 | Destabilizing | 0.956 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/V | 0.2282 | likely_benign | 0.2413 | benign | -0.128 | Destabilizing | 0.971 | D | 0.699 | prob.neutral | N | 0.498066728 | None | None | N |
E/W | 0.8862 | likely_pathogenic | 0.9161 | pathogenic | -0.314 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
E/Y | 0.6322 | likely_pathogenic | 0.6813 | pathogenic | -0.234 | Destabilizing | 0.993 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.