Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6128 | 18607;18608;18609 | chr2:178729871;178729870;178729869 | chr2:179594598;179594597;179594596 |
N2AB | 5811 | 17656;17657;17658 | chr2:178729871;178729870;178729869 | chr2:179594598;179594597;179594596 |
N2A | 4884 | 14875;14876;14877 | chr2:178729871;178729870;178729869 | chr2:179594598;179594597;179594596 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.012 | N | 0.327 | 0.258 | 0.143124449307 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77793E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2829 | likely_benign | 0.2638 | benign | -0.827 | Destabilizing | 0.842 | D | 0.492 | neutral | None | None | None | None | N |
Q/C | 0.6494 | likely_pathogenic | 0.6197 | pathogenic | -0.135 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
Q/D | 0.445 | ambiguous | 0.3985 | ambiguous | -0.767 | Destabilizing | 0.842 | D | 0.452 | neutral | None | None | None | None | N |
Q/E | 0.0808 | likely_benign | 0.0798 | benign | -0.602 | Destabilizing | 0.625 | D | 0.405 | neutral | N | 0.478184909 | None | None | N |
Q/F | 0.6631 | likely_pathogenic | 0.6198 | pathogenic | -0.329 | Destabilizing | 0.974 | D | 0.683 | prob.neutral | None | None | None | None | N |
Q/G | 0.3565 | ambiguous | 0.3328 | benign | -1.24 | Destabilizing | 0.842 | D | 0.577 | neutral | None | None | None | None | N |
Q/H | 0.1918 | likely_benign | 0.1825 | benign | -0.912 | Destabilizing | 0.028 | N | 0.3 | neutral | N | 0.516724655 | None | None | N |
Q/I | 0.3742 | ambiguous | 0.345 | ambiguous | 0.262 | Stabilizing | 0.974 | D | 0.679 | prob.neutral | None | None | None | None | N |
Q/K | 0.0965 | likely_benign | 0.0981 | benign | -0.355 | Destabilizing | 0.454 | N | 0.452 | neutral | N | 0.406458097 | None | None | N |
Q/L | 0.1561 | likely_benign | 0.1419 | benign | 0.262 | Stabilizing | 0.801 | D | 0.589 | neutral | N | 0.512492271 | None | None | N |
Q/M | 0.3926 | ambiguous | 0.3655 | ambiguous | 0.671 | Stabilizing | 0.991 | D | 0.534 | neutral | None | None | None | None | N |
Q/N | 0.3474 | ambiguous | 0.2998 | benign | -1.031 | Destabilizing | 0.842 | D | 0.451 | neutral | None | None | None | None | N |
Q/P | 0.2931 | likely_benign | 0.3032 | benign | -0.07 | Destabilizing | 0.989 | D | 0.623 | neutral | D | 0.537003926 | None | None | N |
Q/R | 0.0942 | likely_benign | 0.0941 | benign | -0.367 | Destabilizing | 0.012 | N | 0.327 | neutral | N | 0.445112486 | None | None | N |
Q/S | 0.3282 | likely_benign | 0.2883 | benign | -1.229 | Destabilizing | 0.842 | D | 0.437 | neutral | None | None | None | None | N |
Q/T | 0.2382 | likely_benign | 0.2125 | benign | -0.855 | Destabilizing | 0.915 | D | 0.554 | neutral | None | None | None | None | N |
Q/V | 0.2727 | likely_benign | 0.248 | benign | -0.07 | Destabilizing | 0.974 | D | 0.615 | neutral | None | None | None | None | N |
Q/W | 0.4626 | ambiguous | 0.4333 | ambiguous | -0.194 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | N |
Q/Y | 0.4293 | ambiguous | 0.3884 | ambiguous | 0.055 | Stabilizing | 0.949 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.