Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6129 | 18610;18611;18612 | chr2:178729868;178729867;178729866 | chr2:179594595;179594594;179594593 |
N2AB | 5812 | 17659;17660;17661 | chr2:178729868;178729867;178729866 | chr2:179594595;179594594;179594593 |
N2A | 4885 | 14878;14879;14880 | chr2:178729868;178729867;178729866 | chr2:179594595;179594594;179594593 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs2080081483 | None | None | N | 0.215 | 0.066 | 0.223847106136 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs2080081483 | None | None | N | 0.215 | 0.066 | 0.223847106136 | gnomAD-4.0.0 | 2.02988E-06 | None | None | None | None | N | None | 3.49406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8083 | likely_pathogenic | 0.7448 | pathogenic | -2.288 | Highly Destabilizing | 0.035 | N | 0.666 | neutral | None | None | None | None | N |
I/C | 0.9092 | likely_pathogenic | 0.8819 | pathogenic | -1.456 | Destabilizing | 0.824 | D | 0.751 | deleterious | None | None | None | None | N |
I/D | 0.9914 | likely_pathogenic | 0.9867 | pathogenic | -2.459 | Highly Destabilizing | 0.555 | D | 0.824 | deleterious | None | None | None | None | N |
I/E | 0.9762 | likely_pathogenic | 0.9666 | pathogenic | -2.18 | Highly Destabilizing | 0.555 | D | 0.809 | deleterious | None | None | None | None | N |
I/F | 0.3354 | likely_benign | 0.3237 | benign | -1.302 | Destabilizing | 0.235 | N | 0.769 | deleterious | None | None | None | None | N |
I/G | 0.956 | likely_pathogenic | 0.9436 | pathogenic | -2.881 | Highly Destabilizing | 0.555 | D | 0.806 | deleterious | None | None | None | None | N |
I/H | 0.9676 | likely_pathogenic | 0.9572 | pathogenic | -2.458 | Highly Destabilizing | 0.935 | D | 0.793 | deleterious | None | None | None | None | N |
I/K | 0.9584 | likely_pathogenic | 0.9421 | pathogenic | -1.48 | Destabilizing | 0.484 | N | 0.81 | deleterious | D | 0.527530969 | None | None | N |
I/L | 0.1465 | likely_benign | 0.1366 | benign | -0.55 | Destabilizing | None | N | 0.24 | neutral | D | 0.527501796 | None | None | N |
I/M | 0.1643 | likely_benign | 0.147 | benign | -0.589 | Destabilizing | 0.317 | N | 0.714 | prob.delet. | N | 0.520440625 | None | None | N |
I/N | 0.91 | likely_pathogenic | 0.869 | pathogenic | -1.955 | Destabilizing | 0.791 | D | 0.826 | deleterious | None | None | None | None | N |
I/P | 0.9832 | likely_pathogenic | 0.9787 | pathogenic | -1.113 | Destabilizing | 0.791 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.9607 | likely_pathogenic | 0.9455 | pathogenic | -1.7 | Destabilizing | 0.791 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.9435 | likely_pathogenic | 0.9208 | pathogenic | -1.47 | Destabilizing | 0.484 | N | 0.826 | deleterious | D | 0.527530969 | None | None | N |
I/S | 0.8961 | likely_pathogenic | 0.8559 | pathogenic | -2.673 | Highly Destabilizing | 0.38 | N | 0.784 | deleterious | None | None | None | None | N |
I/T | 0.7921 | likely_pathogenic | 0.7293 | pathogenic | -2.231 | Highly Destabilizing | 0.062 | N | 0.716 | prob.delet. | N | 0.499258497 | None | None | N |
I/V | 0.0825 | likely_benign | 0.0834 | benign | -1.113 | Destabilizing | None | N | 0.215 | neutral | N | 0.411434268 | None | None | N |
I/W | 0.9646 | likely_pathogenic | 0.959 | pathogenic | -1.704 | Destabilizing | 0.935 | D | 0.795 | deleterious | None | None | None | None | N |
I/Y | 0.8405 | likely_pathogenic | 0.8187 | pathogenic | -1.376 | Destabilizing | 0.555 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.