Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6130 | 18613;18614;18615 | chr2:178729865;178729864;178729863 | chr2:179594592;179594591;179594590 |
N2AB | 5813 | 17662;17663;17664 | chr2:178729865;178729864;178729863 | chr2:179594592;179594591;179594590 |
N2A | 4886 | 14881;14882;14883 | chr2:178729865;178729864;178729863 | chr2:179594592;179594591;179594590 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1379804888 | None | 0.942 | N | 0.582 | 0.346 | 0.754986483899 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/R | rs1379804888 | None | 0.942 | N | 0.582 | 0.346 | 0.754986483899 | gnomAD-4.0.0 | 8.96994E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.67537E-05 | 0 | 0 |
T/S | rs794727816 | None | 0.698 | N | 0.391 | 0.218 | 0.218845423259 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0687 | likely_benign | 0.0697 | benign | -0.58 | Destabilizing | 0.014 | N | 0.223 | neutral | N | 0.499061614 | None | None | N |
T/C | 0.4262 | ambiguous | 0.4435 | ambiguous | -0.41 | Destabilizing | 0.994 | D | 0.553 | neutral | None | None | None | None | N |
T/D | 0.3241 | likely_benign | 0.3451 | ambiguous | 0.222 | Stabilizing | 0.978 | D | 0.558 | neutral | None | None | None | None | N |
T/E | 0.231 | likely_benign | 0.2427 | benign | 0.227 | Stabilizing | 0.956 | D | 0.518 | neutral | None | None | None | None | N |
T/F | 0.1894 | likely_benign | 0.2054 | benign | -0.714 | Destabilizing | 0.978 | D | 0.64 | neutral | None | None | None | None | N |
T/G | 0.2118 | likely_benign | 0.2243 | benign | -0.828 | Destabilizing | 0.754 | D | 0.518 | neutral | None | None | None | None | N |
T/H | 0.2039 | likely_benign | 0.2166 | benign | -1.056 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
T/I | 0.1338 | likely_benign | 0.1374 | benign | -0.02 | Destabilizing | 0.698 | D | 0.493 | neutral | D | 0.531366033 | None | None | N |
T/K | 0.1366 | likely_benign | 0.1398 | benign | -0.498 | Destabilizing | 0.942 | D | 0.524 | neutral | N | 0.516049864 | None | None | N |
T/L | 0.0938 | likely_benign | 0.0984 | benign | -0.02 | Destabilizing | 0.754 | D | 0.398 | neutral | None | None | None | None | N |
T/M | 0.0939 | likely_benign | 0.0949 | benign | 0.008 | Stabilizing | 0.994 | D | 0.564 | neutral | None | None | None | None | N |
T/N | 0.1151 | likely_benign | 0.1198 | benign | -0.453 | Destabilizing | 0.978 | D | 0.524 | neutral | None | None | None | None | N |
T/P | 0.3319 | likely_benign | 0.3966 | ambiguous | -0.174 | Destabilizing | 0.971 | D | 0.578 | neutral | N | 0.516878545 | None | None | N |
T/Q | 0.185 | likely_benign | 0.1887 | benign | -0.526 | Destabilizing | 0.978 | D | 0.58 | neutral | None | None | None | None | N |
T/R | 0.1025 | likely_benign | 0.1064 | benign | -0.351 | Destabilizing | 0.942 | D | 0.582 | neutral | N | 0.52078368 | None | None | N |
T/S | 0.0887 | likely_benign | 0.0924 | benign | -0.735 | Destabilizing | 0.698 | D | 0.391 | neutral | N | 0.446131206 | None | None | N |
T/V | 0.1241 | likely_benign | 0.1237 | benign | -0.174 | Destabilizing | 0.019 | N | 0.303 | neutral | None | None | None | None | N |
T/W | 0.4736 | ambiguous | 0.5144 | ambiguous | -0.709 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
T/Y | 0.2305 | likely_benign | 0.2583 | benign | -0.435 | Destabilizing | 0.993 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.