Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6132 | 18619;18620;18621 | chr2:178729859;178729858;178729857 | chr2:179594586;179594585;179594584 |
N2AB | 5815 | 17668;17669;17670 | chr2:178729859;178729858;178729857 | chr2:179594586;179594585;179594584 |
N2A | 4888 | 14887;14888;14889 | chr2:178729859;178729858;178729857 | chr2:179594586;179594585;179594584 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.58 | 0.29 | 0.382925413656 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.148 | likely_benign | 0.1604 | benign | -0.154 | Destabilizing | 0.999 | D | 0.58 | neutral | N | 0.519012811 | None | None | I |
T/C | 0.6931 | likely_pathogenic | 0.7258 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
T/D | 0.4484 | ambiguous | 0.4786 | ambiguous | 0.017 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/E | 0.3849 | ambiguous | 0.4137 | ambiguous | -0.071 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
T/F | 0.2258 | likely_benign | 0.2645 | benign | -0.741 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
T/G | 0.4326 | ambiguous | 0.4856 | ambiguous | -0.242 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
T/H | 0.2916 | likely_benign | 0.3182 | benign | -0.412 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
T/I | 0.2431 | likely_benign | 0.268 | benign | -0.046 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.506393018 | None | None | I |
T/K | 0.2182 | likely_benign | 0.229 | benign | -0.312 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
T/L | 0.1476 | likely_benign | 0.1645 | benign | -0.046 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
T/M | 0.1079 | likely_benign | 0.1144 | benign | -0.069 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
T/N | 0.1239 | likely_benign | 0.1315 | benign | -0.074 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.451134381 | None | None | I |
T/P | 0.4965 | ambiguous | 0.4991 | ambiguous | -0.056 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.508142359 | None | None | I |
T/Q | 0.2663 | likely_benign | 0.2845 | benign | -0.296 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
T/R | 0.2021 | likely_benign | 0.2152 | benign | 0.003 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
T/S | 0.1128 | likely_benign | 0.1234 | benign | -0.241 | Destabilizing | 0.999 | D | 0.616 | neutral | N | 0.411903989 | None | None | I |
T/V | 0.229 | likely_benign | 0.2468 | benign | -0.056 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/W | 0.6129 | likely_pathogenic | 0.6589 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
T/Y | 0.2823 | likely_benign | 0.3072 | benign | -0.501 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.