Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6140 | 18643;18644;18645 | chr2:178729835;178729834;178729833 | chr2:179594562;179594561;179594560 |
N2AB | 5823 | 17692;17693;17694 | chr2:178729835;178729834;178729833 | chr2:179594562;179594561;179594560 |
N2A | 4896 | 14911;14912;14913 | chr2:178729835;178729834;178729833 | chr2:179594562;179594561;179594560 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1181020679 | -1.379 | 1.0 | D | 0.718 | 0.705 | 0.826048732949 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
Y/C | rs1181020679 | -1.379 | 1.0 | D | 0.718 | 0.705 | 0.826048732949 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85866E-06 | 0 | 0 |
Y/H | None | None | 0.998 | N | 0.576 | 0.615 | 0.675278370098 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7599 | likely_pathogenic | 0.7499 | pathogenic | -2.554 | Highly Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | N |
Y/C | 0.3973 | ambiguous | 0.432 | ambiguous | -1.072 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | D | 0.551702065 | None | None | N |
Y/D | 0.6495 | likely_pathogenic | 0.6381 | pathogenic | -1.126 | Destabilizing | 0.998 | D | 0.742 | deleterious | D | 0.551702065 | None | None | N |
Y/E | 0.8316 | likely_pathogenic | 0.8183 | pathogenic | -1.038 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
Y/F | 0.0737 | likely_benign | 0.0742 | benign | -1.158 | Destabilizing | 0.031 | N | 0.211 | neutral | N | 0.456044342 | None | None | N |
Y/G | 0.7017 | likely_pathogenic | 0.688 | pathogenic | -2.871 | Highly Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
Y/H | 0.2386 | likely_benign | 0.2311 | benign | -1.171 | Destabilizing | 0.998 | D | 0.576 | neutral | N | 0.513594224 | None | None | N |
Y/I | 0.5446 | ambiguous | 0.5656 | pathogenic | -1.58 | Destabilizing | 0.97 | D | 0.617 | neutral | None | None | None | None | N |
Y/K | 0.6661 | likely_pathogenic | 0.6514 | pathogenic | -1.13 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Y/L | 0.5002 | ambiguous | 0.4882 | ambiguous | -1.58 | Destabilizing | 0.871 | D | 0.565 | neutral | None | None | None | None | N |
Y/M | 0.6512 | likely_pathogenic | 0.644 | pathogenic | -1.195 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/N | 0.3211 | likely_benign | 0.3081 | benign | -1.352 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | N | 0.512112967 | None | None | N |
Y/P | 0.9927 | likely_pathogenic | 0.9937 | pathogenic | -1.902 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
Y/Q | 0.6508 | likely_pathogenic | 0.629 | pathogenic | -1.363 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/R | 0.536 | ambiguous | 0.5233 | ambiguous | -0.593 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
Y/S | 0.408 | ambiguous | 0.391 | ambiguous | -1.969 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | N | 0.492007249 | None | None | N |
Y/T | 0.6709 | likely_pathogenic | 0.6601 | pathogenic | -1.789 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
Y/V | 0.5269 | ambiguous | 0.5372 | ambiguous | -1.902 | Destabilizing | 0.97 | D | 0.571 | neutral | None | None | None | None | N |
Y/W | 0.5046 | ambiguous | 0.5216 | ambiguous | -0.632 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.