Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6146 | 18661;18662;18663 | chr2:178729817;178729816;178729815 | chr2:179594544;179594543;179594542 |
N2AB | 5829 | 17710;17711;17712 | chr2:178729817;178729816;178729815 | chr2:179594544;179594543;179594542 |
N2A | 4902 | 14929;14930;14931 | chr2:178729817;178729816;178729815 | chr2:179594544;179594543;179594542 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1578142340 | None | 0.722 | D | 0.551 | 0.561 | 0.773736090878 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 2.98864E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65678E-05 |
I/V | rs2080073128 | None | 0.003 | D | 0.209 | 0.119 | 0.520110530135 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs2080073128 | None | 0.003 | D | 0.209 | 0.119 | 0.520110530135 | gnomAD-4.0.0 | 6.57065E-06 | None | None | None | None | N | None | 2.41161E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5167 | ambiguous | 0.5347 | ambiguous | -2.29 | Highly Destabilizing | 0.415 | N | 0.535 | neutral | None | None | None | None | N |
I/C | 0.7928 | likely_pathogenic | 0.7993 | pathogenic | -1.437 | Destabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | N |
I/D | 0.7618 | likely_pathogenic | 0.7682 | pathogenic | -2.427 | Highly Destabilizing | 0.987 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/E | 0.6731 | likely_pathogenic | 0.6866 | pathogenic | -2.187 | Highly Destabilizing | 0.961 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/F | 0.1903 | likely_benign | 0.1926 | benign | -1.405 | Destabilizing | 0.923 | D | 0.527 | neutral | None | None | None | None | N |
I/G | 0.777 | likely_pathogenic | 0.7959 | pathogenic | -2.82 | Highly Destabilizing | 0.961 | D | 0.66 | neutral | None | None | None | None | N |
I/H | 0.6812 | likely_pathogenic | 0.6916 | pathogenic | -2.19 | Highly Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/K | 0.5408 | ambiguous | 0.5507 | ambiguous | -1.629 | Destabilizing | 0.949 | D | 0.693 | prob.neutral | D | 0.559344933 | None | None | N |
I/L | 0.1123 | likely_benign | 0.1167 | benign | -0.755 | Destabilizing | 0.19 | N | 0.377 | neutral | N | 0.458633569 | None | None | N |
I/M | 0.1024 | likely_benign | 0.1037 | benign | -0.673 | Destabilizing | 0.901 | D | 0.549 | neutral | N | 0.512741169 | None | None | N |
I/N | 0.3778 | ambiguous | 0.3871 | ambiguous | -1.986 | Destabilizing | 0.987 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/P | 0.8342 | likely_pathogenic | 0.8589 | pathogenic | -1.249 | Destabilizing | 0.987 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/Q | 0.6048 | likely_pathogenic | 0.6184 | pathogenic | -1.819 | Destabilizing | 0.987 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/R | 0.4834 | ambiguous | 0.4906 | ambiguous | -1.484 | Destabilizing | 0.949 | D | 0.73 | prob.delet. | D | 0.541240678 | None | None | N |
I/S | 0.5323 | ambiguous | 0.5484 | ambiguous | -2.674 | Highly Destabilizing | 0.923 | D | 0.623 | neutral | None | None | None | None | N |
I/T | 0.5162 | ambiguous | 0.6129 | pathogenic | -2.276 | Highly Destabilizing | 0.722 | D | 0.551 | neutral | D | 0.538198804 | None | None | N |
I/V | 0.0904 | likely_benign | 0.0935 | benign | -1.249 | Destabilizing | 0.003 | N | 0.209 | neutral | D | 0.524632062 | None | None | N |
I/W | 0.7858 | likely_pathogenic | 0.7963 | pathogenic | -1.715 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/Y | 0.5315 | ambiguous | 0.5287 | ambiguous | -1.397 | Destabilizing | 0.961 | D | 0.648 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.