Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6155 | 18688;18689;18690 | chr2:178729790;178729789;178729788 | chr2:179594517;179594516;179594515 |
N2AB | 5838 | 17737;17738;17739 | chr2:178729790;178729789;178729788 | chr2:179594517;179594516;179594515 |
N2A | 4911 | 14956;14957;14958 | chr2:178729790;178729789;178729788 | chr2:179594517;179594516;179594515 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs768149481 | -0.247 | 0.248 | D | 0.131 | 0.138 | 0.272639205421 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.53941E-04 | None | 0 | None | 0 | 0 | 0 |
S/A | rs768149481 | -0.247 | 0.248 | D | 0.131 | 0.138 | 0.272639205421 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/A | rs768149481 | -0.247 | 0.248 | D | 0.131 | 0.138 | 0.272639205421 | gnomAD-4.0.0 | 1.85913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.68777E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0864 | likely_benign | 0.0911 | benign | -0.484 | Destabilizing | 0.248 | N | 0.131 | neutral | D | 0.526728218 | None | None | N |
S/C | 0.1594 | likely_benign | 0.1728 | benign | -0.323 | Destabilizing | 1.0 | D | 0.497 | neutral | D | 0.524867489 | None | None | N |
S/D | 0.3001 | likely_benign | 0.29 | benign | 0.44 | Stabilizing | 0.985 | D | 0.404 | neutral | None | None | None | None | N |
S/E | 0.3906 | ambiguous | 0.3876 | ambiguous | 0.404 | Stabilizing | 0.985 | D | 0.401 | neutral | None | None | None | None | N |
S/F | 0.1425 | likely_benign | 0.1531 | benign | -0.873 | Destabilizing | 0.989 | D | 0.584 | neutral | N | 0.494330518 | None | None | N |
S/G | 0.1263 | likely_benign | 0.127 | benign | -0.675 | Destabilizing | 0.97 | D | 0.41 | neutral | None | None | None | None | N |
S/H | 0.2449 | likely_benign | 0.246 | benign | -1.095 | Destabilizing | 1.0 | D | 0.499 | neutral | None | None | None | None | N |
S/I | 0.1523 | likely_benign | 0.1542 | benign | -0.098 | Destabilizing | 0.942 | D | 0.506 | neutral | None | None | None | None | N |
S/K | 0.4889 | ambiguous | 0.497 | ambiguous | -0.372 | Destabilizing | 0.97 | D | 0.401 | neutral | None | None | None | None | N |
S/L | 0.1006 | likely_benign | 0.1045 | benign | -0.098 | Destabilizing | 0.092 | N | 0.329 | neutral | None | None | None | None | N |
S/M | 0.2202 | likely_benign | 0.2292 | benign | 0.004 | Stabilizing | 0.991 | D | 0.508 | neutral | None | None | None | None | N |
S/N | 0.1424 | likely_benign | 0.1373 | benign | -0.252 | Destabilizing | 0.985 | D | 0.439 | neutral | None | None | None | None | N |
S/P | 0.5614 | ambiguous | 0.562 | ambiguous | -0.193 | Destabilizing | 0.994 | D | 0.468 | neutral | D | 0.52436051 | None | None | N |
S/Q | 0.3848 | ambiguous | 0.3863 | ambiguous | -0.374 | Destabilizing | 0.999 | D | 0.457 | neutral | None | None | None | None | N |
S/R | 0.3653 | ambiguous | 0.37 | ambiguous | -0.279 | Destabilizing | 0.996 | D | 0.472 | neutral | None | None | None | None | N |
S/T | 0.0788 | likely_benign | 0.0828 | benign | -0.335 | Destabilizing | 0.248 | N | 0.207 | neutral | N | 0.484302805 | None | None | N |
S/V | 0.1602 | likely_benign | 0.1666 | benign | -0.193 | Destabilizing | 0.942 | D | 0.504 | neutral | None | None | None | None | N |
S/W | 0.2563 | likely_benign | 0.2719 | benign | -0.876 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/Y | 0.1287 | likely_benign | 0.1353 | benign | -0.581 | Destabilizing | 0.998 | D | 0.588 | neutral | N | 0.498115953 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.