Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6158 | 18697;18698;18699 | chr2:178729781;178729780;178729779 | chr2:179594508;179594507;179594506 |
N2AB | 5841 | 17746;17747;17748 | chr2:178729781;178729780;178729779 | chr2:179594508;179594507;179594506 |
N2A | 4914 | 14965;14966;14967 | chr2:178729781;178729780;178729779 | chr2:179594508;179594507;179594506 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.892 | N | 0.473 | 0.332 | 0.377799810692 | gnomAD-4.0.0 | 3.18276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
D/N | rs2080068286 | None | 0.099 | N | 0.251 | 0.239 | 0.288352970974 | gnomAD-4.0.0 | 5.47383E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.76402E-04 | None | 0 | 0 | 8.99488E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1652 | likely_benign | 0.1855 | benign | -0.05 | Destabilizing | 0.892 | D | 0.396 | neutral | N | 0.496562698 | None | None | N |
D/C | 0.5797 | likely_pathogenic | 0.6052 | pathogenic | -0.345 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
D/E | 0.154 | likely_benign | 0.1649 | benign | -0.367 | Destabilizing | 0.025 | N | 0.285 | neutral | N | 0.513321777 | None | None | N |
D/F | 0.6165 | likely_pathogenic | 0.6619 | pathogenic | 0.017 | Stabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
D/G | 0.1042 | likely_benign | 0.1173 | benign | -0.175 | Destabilizing | 0.892 | D | 0.473 | neutral | N | 0.510467899 | None | None | N |
D/H | 0.179 | likely_benign | 0.2049 | benign | 0.691 | Stabilizing | 0.995 | D | 0.455 | neutral | N | 0.514199654 | None | None | N |
D/I | 0.5381 | ambiguous | 0.5798 | pathogenic | 0.221 | Stabilizing | 0.987 | D | 0.55 | neutral | None | None | None | None | N |
D/K | 0.2494 | likely_benign | 0.2773 | benign | 0.389 | Stabilizing | 0.845 | D | 0.419 | neutral | None | None | None | None | N |
D/L | 0.4469 | ambiguous | 0.4918 | ambiguous | 0.221 | Stabilizing | 0.975 | D | 0.552 | neutral | None | None | None | None | N |
D/M | 0.676 | likely_pathogenic | 0.7094 | pathogenic | -0.053 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
D/N | 0.0815 | likely_benign | 0.0837 | benign | -0.089 | Destabilizing | 0.099 | N | 0.251 | neutral | N | 0.46797349 | None | None | N |
D/P | 0.6057 | likely_pathogenic | 0.6226 | pathogenic | 0.15 | Stabilizing | 0.987 | D | 0.439 | neutral | None | None | None | None | N |
D/Q | 0.2489 | likely_benign | 0.2756 | benign | -0.047 | Destabilizing | 0.95 | D | 0.459 | neutral | None | None | None | None | N |
D/R | 0.2372 | likely_benign | 0.2746 | benign | 0.686 | Stabilizing | 0.975 | D | 0.491 | neutral | None | None | None | None | N |
D/S | 0.107 | likely_benign | 0.1169 | benign | -0.127 | Destabilizing | 0.916 | D | 0.443 | neutral | None | None | None | None | N |
D/T | 0.2923 | likely_benign | 0.32 | benign | -0.008 | Destabilizing | 0.975 | D | 0.417 | neutral | None | None | None | None | N |
D/V | 0.3446 | ambiguous | 0.3824 | ambiguous | 0.15 | Stabilizing | 0.983 | D | 0.549 | neutral | D | 0.530582389 | None | None | N |
D/W | 0.7836 | likely_pathogenic | 0.8209 | pathogenic | 0.103 | Stabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
D/Y | 0.2198 | likely_benign | 0.2438 | benign | 0.245 | Stabilizing | 0.999 | D | 0.536 | neutral | N | 0.514199654 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.