Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6161 | 18706;18707;18708 | chr2:178729772;178729771;178729770 | chr2:179594499;179594498;179594497 |
N2AB | 5844 | 17755;17756;17757 | chr2:178729772;178729771;178729770 | chr2:179594499;179594498;179594497 |
N2A | 4917 | 14974;14975;14976 | chr2:178729772;178729771;178729770 | chr2:179594499;179594498;179594497 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | N | 0.824 | 0.444 | 0.589695452637 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7202 | likely_pathogenic | 0.6609 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/D | 0.9489 | likely_pathogenic | 0.9189 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.493570049 | None | None | N |
A/E | 0.9062 | likely_pathogenic | 0.8493 | pathogenic | -1.749 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/F | 0.7918 | likely_pathogenic | 0.7197 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/G | 0.3032 | likely_benign | 0.2896 | benign | -1.146 | Destabilizing | 1.0 | D | 0.597 | neutral | N | 0.509529324 | None | None | N |
A/H | 0.9384 | likely_pathogenic | 0.9087 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
A/I | 0.6587 | likely_pathogenic | 0.5358 | ambiguous | 0.698 | Stabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/K | 0.9696 | likely_pathogenic | 0.9493 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/L | 0.5164 | ambiguous | 0.4256 | ambiguous | 0.698 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/M | 0.6483 | likely_pathogenic | 0.542 | ambiguous | 0.361 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/N | 0.9036 | likely_pathogenic | 0.8524 | pathogenic | -0.984 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/P | 0.8973 | likely_pathogenic | 0.9016 | pathogenic | 0.293 | Stabilizing | 1.0 | D | 0.824 | deleterious | N | 0.510713253 | None | None | N |
A/Q | 0.8925 | likely_pathogenic | 0.8458 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/R | 0.9311 | likely_pathogenic | 0.8994 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/S | 0.2366 | likely_benign | 0.1979 | benign | -1.372 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.504928793 | None | None | N |
A/T | 0.3183 | likely_benign | 0.2216 | benign | -1.019 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.484389337 | None | None | N |
A/V | 0.3159 | likely_benign | 0.2319 | benign | 0.293 | Stabilizing | 1.0 | D | 0.634 | neutral | N | 0.492329055 | None | None | N |
A/W | 0.9768 | likely_pathogenic | 0.9602 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/Y | 0.9018 | likely_pathogenic | 0.8572 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.