Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6163 | 18712;18713;18714 | chr2:178729766;178729765;178729764 | chr2:179594493;179594492;179594491 |
N2AB | 5846 | 17761;17762;17763 | chr2:178729766;178729765;178729764 | chr2:179594493;179594492;179594491 |
N2A | 4919 | 14980;14981;14982 | chr2:178729766;178729765;178729764 | chr2:179594493;179594492;179594491 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1458021092 | None | 0.891 | D | 0.813 | 0.622 | 0.827827249136 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8179 | likely_pathogenic | 0.8335 | pathogenic | -1.403 | Destabilizing | 0.842 | D | 0.771 | deleterious | None | None | None | None | N |
F/C | 0.3594 | ambiguous | 0.3808 | ambiguous | -1.086 | Destabilizing | 0.997 | D | 0.841 | deleterious | N | 0.510878905 | None | None | N |
F/D | 0.9923 | likely_pathogenic | 0.9937 | pathogenic | -2.701 | Highly Destabilizing | 0.991 | D | 0.855 | deleterious | None | None | None | None | N |
F/E | 0.9877 | likely_pathogenic | 0.9899 | pathogenic | -2.48 | Highly Destabilizing | 0.991 | D | 0.845 | deleterious | None | None | None | None | N |
F/G | 0.9324 | likely_pathogenic | 0.9404 | pathogenic | -1.804 | Destabilizing | 0.991 | D | 0.835 | deleterious | None | None | None | None | N |
F/H | 0.9157 | likely_pathogenic | 0.9197 | pathogenic | -1.767 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
F/I | 0.2248 | likely_benign | 0.2736 | benign | -0.097 | Destabilizing | 0.454 | N | 0.675 | neutral | N | 0.398804193 | None | None | N |
F/K | 0.9833 | likely_pathogenic | 0.9849 | pathogenic | -1.532 | Destabilizing | 0.974 | D | 0.829 | deleterious | None | None | None | None | N |
F/L | 0.558 | ambiguous | 0.6113 | pathogenic | -0.097 | Destabilizing | 0.002 | N | 0.355 | neutral | N | 0.252004674 | None | None | N |
F/M | 0.4692 | ambiguous | 0.506 | ambiguous | -0.32 | Destabilizing | 0.949 | D | 0.692 | prob.neutral | None | None | None | None | N |
F/N | 0.9681 | likely_pathogenic | 0.9724 | pathogenic | -2.248 | Highly Destabilizing | 0.991 | D | 0.861 | deleterious | None | None | None | None | N |
F/P | 0.9966 | likely_pathogenic | 0.9972 | pathogenic | -0.543 | Destabilizing | 0.991 | D | 0.863 | deleterious | None | None | None | None | N |
F/Q | 0.9674 | likely_pathogenic | 0.9714 | pathogenic | -1.886 | Destabilizing | 0.991 | D | 0.862 | deleterious | None | None | None | None | N |
F/R | 0.9524 | likely_pathogenic | 0.9545 | pathogenic | -1.897 | Destabilizing | 0.974 | D | 0.856 | deleterious | None | None | None | None | N |
F/S | 0.8784 | likely_pathogenic | 0.8837 | pathogenic | -2.449 | Highly Destabilizing | 0.891 | D | 0.813 | deleterious | D | 0.529734024 | None | None | N |
F/T | 0.9052 | likely_pathogenic | 0.9168 | pathogenic | -2.103 | Highly Destabilizing | 0.915 | D | 0.793 | deleterious | None | None | None | None | N |
F/V | 0.2463 | likely_benign | 0.2858 | benign | -0.543 | Destabilizing | 0.454 | N | 0.727 | prob.delet. | N | 0.444115195 | None | None | N |
F/W | 0.7171 | likely_pathogenic | 0.7207 | pathogenic | -0.134 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/Y | 0.299 | likely_benign | 0.3097 | benign | -0.385 | Destabilizing | 0.891 | D | 0.653 | neutral | N | 0.492119786 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.