Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6167 | 18724;18725;18726 | chr2:178729754;178729753;178729752 | chr2:179594481;179594480;179594479 |
N2AB | 5850 | 17773;17774;17775 | chr2:178729754;178729753;178729752 | chr2:179594481;179594480;179594479 |
N2A | 4923 | 14992;14993;14994 | chr2:178729754;178729753;178729752 | chr2:179594481;179594480;179594479 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 0.002 | N | 0.466 | 0.1 | 0.345859378078 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85851E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0808 | likely_benign | 0.0858 | benign | -0.274 | Destabilizing | 0.027 | N | 0.393 | neutral | N | 0.464567825 | None | None | N |
G/C | 0.1371 | likely_benign | 0.1574 | benign | -0.824 | Destabilizing | 0.002 | N | 0.466 | neutral | N | 0.494196068 | None | None | N |
G/D | 0.0714 | likely_benign | 0.0775 | benign | -0.376 | Destabilizing | None | N | 0.199 | neutral | N | 0.413464214 | None | None | N |
G/E | 0.0888 | likely_benign | 0.0964 | benign | -0.538 | Destabilizing | 0.081 | N | 0.431 | neutral | None | None | None | None | N |
G/F | 0.2698 | likely_benign | 0.3157 | benign | -1.059 | Destabilizing | 0.555 | D | 0.461 | neutral | None | None | None | None | N |
G/H | 0.1326 | likely_benign | 0.1612 | benign | -0.583 | Destabilizing | 0.38 | N | 0.414 | neutral | None | None | None | None | N |
G/I | 0.1577 | likely_benign | 0.1852 | benign | -0.41 | Destabilizing | 0.555 | D | 0.465 | neutral | None | None | None | None | N |
G/K | 0.1394 | likely_benign | 0.1551 | benign | -0.622 | Destabilizing | 0.081 | N | 0.429 | neutral | None | None | None | None | N |
G/L | 0.1808 | likely_benign | 0.2101 | benign | -0.41 | Destabilizing | 0.149 | N | 0.465 | neutral | None | None | None | None | N |
G/M | 0.2463 | likely_benign | 0.2692 | benign | -0.359 | Destabilizing | 0.824 | D | 0.437 | neutral | None | None | None | None | N |
G/N | 0.1049 | likely_benign | 0.1112 | benign | -0.29 | Destabilizing | 0.001 | N | 0.167 | neutral | None | None | None | None | N |
G/P | 0.4618 | ambiguous | 0.5624 | ambiguous | -0.332 | Destabilizing | 0.555 | D | 0.427 | neutral | None | None | None | None | N |
G/Q | 0.1243 | likely_benign | 0.1405 | benign | -0.583 | Destabilizing | 0.005 | N | 0.33 | neutral | None | None | None | None | N |
G/R | 0.0934 | likely_benign | 0.1109 | benign | -0.25 | Destabilizing | 0.188 | N | 0.451 | neutral | N | 0.452542677 | None | None | N |
G/S | 0.0652 | likely_benign | 0.0718 | benign | -0.467 | Destabilizing | 0.001 | N | 0.165 | neutral | N | 0.400881706 | None | None | N |
G/T | 0.0925 | likely_benign | 0.1029 | benign | -0.558 | Destabilizing | 0.081 | N | 0.445 | neutral | None | None | None | None | N |
G/V | 0.1201 | likely_benign | 0.1389 | benign | -0.332 | Destabilizing | 0.117 | N | 0.493 | neutral | N | 0.515074003 | None | None | N |
G/W | 0.1977 | likely_benign | 0.2239 | benign | -1.205 | Destabilizing | 0.935 | D | 0.479 | neutral | None | None | None | None | N |
G/Y | 0.1719 | likely_benign | 0.2076 | benign | -0.832 | Destabilizing | 0.791 | D | 0.461 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.