Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6169 | 18730;18731;18732 | chr2:178729748;178729747;178729746 | chr2:179594475;179594474;179594473 |
N2AB | 5852 | 17779;17780;17781 | chr2:178729748;178729747;178729746 | chr2:179594475;179594474;179594473 |
N2A | 4925 | 14998;14999;15000 | chr2:178729748;178729747;178729746 | chr2:179594475;179594474;179594473 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.425 | N | 0.375 | 0.3 | 0.492267288202 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/K | None | None | 0.002 | N | 0.159 | 0.147 | 0.221019684889 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85848E-06 | 0 | 0 |
R/T | None | None | 0.642 | N | 0.339 | 0.275 | 0.516715673709 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85848E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1156 | likely_benign | 0.1311 | benign | -0.229 | Destabilizing | 0.495 | N | 0.354 | neutral | None | None | None | None | N |
R/C | 0.1471 | likely_benign | 0.1525 | benign | -0.174 | Destabilizing | 0.995 | D | 0.267 | neutral | None | None | None | None | N |
R/D | 0.2212 | likely_benign | 0.2263 | benign | 0.049 | Stabilizing | 0.003 | N | 0.178 | neutral | None | None | None | None | N |
R/E | 0.1366 | likely_benign | 0.145 | benign | 0.129 | Stabilizing | 0.013 | N | 0.146 | neutral | None | None | None | None | N |
R/F | 0.2624 | likely_benign | 0.2812 | benign | -0.336 | Destabilizing | 0.944 | D | 0.275 | neutral | None | None | None | None | N |
R/G | 0.0796 | likely_benign | 0.0928 | benign | -0.47 | Destabilizing | 0.425 | N | 0.375 | neutral | N | 0.440168026 | None | None | N |
R/H | 0.0842 | likely_benign | 0.0882 | benign | -0.933 | Destabilizing | 0.007 | N | 0.248 | neutral | None | None | None | None | N |
R/I | 0.1268 | likely_benign | 0.1281 | benign | 0.386 | Stabilizing | 0.944 | D | 0.298 | neutral | None | None | None | None | N |
R/K | 0.0702 | likely_benign | 0.0719 | benign | -0.191 | Destabilizing | 0.002 | N | 0.159 | neutral | N | 0.455153334 | None | None | N |
R/L | 0.1101 | likely_benign | 0.1184 | benign | 0.386 | Stabilizing | 0.704 | D | 0.345 | neutral | None | None | None | None | N |
R/M | 0.117 | likely_benign | 0.1231 | benign | 0.057 | Stabilizing | 0.975 | D | 0.291 | neutral | N | 0.495637306 | None | None | N |
R/N | 0.1892 | likely_benign | 0.1976 | benign | 0.241 | Stabilizing | 0.543 | D | 0.215 | neutral | None | None | None | None | N |
R/P | 0.3523 | ambiguous | 0.4028 | ambiguous | 0.202 | Stabilizing | 0.828 | D | 0.311 | neutral | None | None | None | None | N |
R/Q | 0.0745 | likely_benign | 0.0793 | benign | 0.067 | Stabilizing | 0.704 | D | 0.245 | neutral | None | None | None | None | N |
R/S | 0.1303 | likely_benign | 0.1443 | benign | -0.298 | Destabilizing | 0.425 | N | 0.339 | neutral | N | 0.407882249 | None | None | N |
R/T | 0.0788 | likely_benign | 0.082 | benign | -0.065 | Destabilizing | 0.642 | D | 0.339 | neutral | N | 0.39855069 | None | None | N |
R/V | 0.1483 | likely_benign | 0.149 | benign | 0.202 | Stabilizing | 0.828 | D | 0.341 | neutral | None | None | None | None | N |
R/W | 0.1148 | likely_benign | 0.1228 | benign | -0.237 | Destabilizing | 0.993 | D | 0.31 | neutral | D | 0.533424904 | None | None | N |
R/Y | 0.2178 | likely_benign | 0.229 | benign | 0.14 | Stabilizing | 0.893 | D | 0.286 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.