Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6174 | 18745;18746;18747 | chr2:178729733;178729732;178729731 | chr2:179594460;179594459;179594458 |
N2AB | 5857 | 17794;17795;17796 | chr2:178729733;178729732;178729731 | chr2:179594460;179594459;179594458 |
N2A | 4930 | 15013;15014;15015 | chr2:178729733;178729732;178729731 | chr2:179594460;179594459;179594458 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 1.0 | D | 0.747 | 0.623 | 0.96544231252 | gnomAD-4.0.0 | 4.78963E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.2965E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3221 | likely_benign | 0.3606 | ambiguous | -0.785 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.596537672 | None | None | N |
G/C | 0.6988 | likely_pathogenic | 0.752 | pathogenic | -1.108 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/D | 0.7173 | likely_pathogenic | 0.7775 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/E | 0.7644 | likely_pathogenic | 0.815 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.682931488 | None | None | N |
G/F | 0.9448 | likely_pathogenic | 0.9545 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/H | 0.8389 | likely_pathogenic | 0.8801 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/I | 0.9196 | likely_pathogenic | 0.9358 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
G/K | 0.7502 | likely_pathogenic | 0.8048 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/L | 0.8999 | likely_pathogenic | 0.9198 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/M | 0.9227 | likely_pathogenic | 0.9394 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/N | 0.7812 | likely_pathogenic | 0.8255 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/P | 0.9903 | likely_pathogenic | 0.9922 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/Q | 0.7127 | likely_pathogenic | 0.7747 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
G/R | 0.5666 | likely_pathogenic | 0.6366 | pathogenic | -1.007 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.682931488 | None | None | N |
G/S | 0.29 | likely_benign | 0.3376 | benign | -1.37 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/T | 0.731 | likely_pathogenic | 0.7773 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/V | 0.8396 | likely_pathogenic | 0.868 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.682931488 | None | None | N |
G/W | 0.9026 | likely_pathogenic | 0.9267 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.683133292 | None | None | N |
G/Y | 0.91 | likely_pathogenic | 0.934 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.