Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6176 | 18751;18752;18753 | chr2:178729727;178729726;178729725 | chr2:179594454;179594453;179594452 |
N2AB | 5859 | 17800;17801;17802 | chr2:178729727;178729726;178729725 | chr2:179594454;179594453;179594452 |
N2A | 4932 | 15019;15020;15021 | chr2:178729727;178729726;178729725 | chr2:179594454;179594453;179594452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.809 | 0.796 | 0.858506001042 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8831 | likely_pathogenic | 0.8957 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/C | 0.5107 | ambiguous | 0.5234 | ambiguous | -0.739 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.689782115 | None | None | N |
Y/D | 0.9897 | likely_pathogenic | 0.9903 | pathogenic | -2.298 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.689983919 | None | None | N |
Y/E | 0.9933 | likely_pathogenic | 0.9933 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
Y/F | 0.0908 | likely_benign | 0.0939 | benign | -0.453 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | D | 0.586075955 | None | None | N |
Y/G | 0.9428 | likely_pathogenic | 0.9449 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Y/H | 0.8739 | likely_pathogenic | 0.8763 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.68958031 | None | None | N |
Y/I | 0.5413 | ambiguous | 0.5579 | ambiguous | -0.104 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/K | 0.9911 | likely_pathogenic | 0.9911 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/L | 0.4915 | ambiguous | 0.459 | ambiguous | -0.104 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
Y/M | 0.7915 | likely_pathogenic | 0.7837 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/N | 0.9368 | likely_pathogenic | 0.9365 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.689782115 | None | None | N |
Y/P | 0.9915 | likely_pathogenic | 0.9925 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
Y/Q | 0.9859 | likely_pathogenic | 0.9863 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/R | 0.966 | likely_pathogenic | 0.9669 | pathogenic | -1.83 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Y/S | 0.8824 | likely_pathogenic | 0.8897 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.689782115 | None | None | N |
Y/T | 0.9321 | likely_pathogenic | 0.941 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/V | 0.4092 | ambiguous | 0.421 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/W | 0.5738 | likely_pathogenic | 0.6008 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.