Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6180 | 18763;18764;18765 | chr2:178729715;178729714;178729713 | chr2:179594442;179594441;179594440 |
N2AB | 5863 | 17812;17813;17814 | chr2:178729715;178729714;178729713 | chr2:179594442;179594441;179594440 |
N2A | 4936 | 15031;15032;15033 | chr2:178729715;178729714;178729713 | chr2:179594442;179594441;179594440 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | D | 0.886 | 0.587 | 0.73903095977 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 5.97729E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | None | None | 1.0 | D | 0.582 | 0.544 | 0.629616166261 | gnomAD-4.0.0 | 4.10542E-06 | None | None | None | None | N | None | 2.98864E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49756E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9091 | likely_pathogenic | 0.9114 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/D | 0.9893 | likely_pathogenic | 0.9854 | pathogenic | -2.607 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.656645135 | None | None | N |
A/E | 0.9767 | likely_pathogenic | 0.9685 | pathogenic | -2.418 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/F | 0.9012 | likely_pathogenic | 0.9076 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
A/G | 0.3255 | likely_benign | 0.2959 | benign | -1.806 | Destabilizing | 1.0 | D | 0.585 | neutral | D | 0.594950059 | None | None | N |
A/H | 0.9949 | likely_pathogenic | 0.9937 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/I | 0.5441 | ambiguous | 0.6105 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/K | 0.996 | likely_pathogenic | 0.9946 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
A/L | 0.6061 | likely_pathogenic | 0.6319 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
A/M | 0.748 | likely_pathogenic | 0.7644 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/N | 0.9791 | likely_pathogenic | 0.9757 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
A/P | 0.9857 | likely_pathogenic | 0.9847 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.640191805 | None | None | N |
A/Q | 0.9814 | likely_pathogenic | 0.9764 | pathogenic | -1.495 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/R | 0.9884 | likely_pathogenic | 0.985 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/S | 0.4518 | ambiguous | 0.4387 | ambiguous | -2.073 | Highly Destabilizing | 1.0 | D | 0.582 | neutral | D | 0.618661213 | None | None | N |
A/T | 0.5609 | ambiguous | 0.5595 | ambiguous | -1.761 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.618459409 | None | None | N |
A/V | 0.3181 | likely_benign | 0.3481 | ambiguous | -0.501 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.505315792 | None | None | N |
A/W | 0.9953 | likely_pathogenic | 0.9948 | pathogenic | -1.499 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/Y | 0.9783 | likely_pathogenic | 0.9759 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.