Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6183 | 18772;18773;18774 | chr2:178729706;178729705;178729704 | chr2:179594433;179594432;179594431 |
N2AB | 5866 | 17821;17822;17823 | chr2:178729706;178729705;178729704 | chr2:179594433;179594432;179594431 |
N2A | 4939 | 15040;15041;15042 | chr2:178729706;178729705;178729704 | chr2:179594433;179594432;179594431 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.969 | N | 0.5 | 0.432 | 0.382087116544 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 0.939 | N | 0.449 | 0.265 | 0.456089687795 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1164 | likely_benign | 0.1289 | benign | 0.006 | Stabilizing | 0.939 | D | 0.459 | neutral | N | 0.427372087 | None | None | I |
D/C | 0.6014 | likely_pathogenic | 0.6609 | pathogenic | 0.139 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/E | 0.1079 | likely_benign | 0.1216 | benign | -0.261 | Destabilizing | 0.049 | N | 0.351 | neutral | N | 0.410207691 | None | None | I |
D/F | 0.4628 | ambiguous | 0.5271 | ambiguous | -0.174 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | I |
D/G | 0.1486 | likely_benign | 0.1672 | benign | -0.109 | Destabilizing | 0.969 | D | 0.5 | neutral | N | 0.464967683 | None | None | I |
D/H | 0.2217 | likely_benign | 0.258 | benign | 0.229 | Stabilizing | 0.998 | D | 0.501 | neutral | D | 0.534443624 | None | None | I |
D/I | 0.2273 | likely_benign | 0.2616 | benign | 0.238 | Stabilizing | 0.993 | D | 0.627 | neutral | None | None | None | None | I |
D/K | 0.2369 | likely_benign | 0.2761 | benign | 0.545 | Stabilizing | 0.91 | D | 0.473 | neutral | None | None | None | None | I |
D/L | 0.2667 | likely_benign | 0.3058 | benign | 0.238 | Stabilizing | 0.986 | D | 0.596 | neutral | None | None | None | None | I |
D/M | 0.4762 | ambiguous | 0.5262 | ambiguous | 0.215 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
D/N | 0.0994 | likely_benign | 0.1109 | benign | 0.409 | Stabilizing | 0.939 | D | 0.449 | neutral | N | 0.509950611 | None | None | I |
D/P | 0.4912 | ambiguous | 0.5552 | ambiguous | 0.18 | Stabilizing | 0.993 | D | 0.495 | neutral | None | None | None | None | I |
D/Q | 0.246 | likely_benign | 0.2828 | benign | 0.389 | Stabilizing | 0.973 | D | 0.441 | neutral | None | None | None | None | I |
D/R | 0.2699 | likely_benign | 0.3134 | benign | 0.655 | Stabilizing | 0.986 | D | 0.551 | neutral | None | None | None | None | I |
D/S | 0.1086 | likely_benign | 0.1211 | benign | 0.307 | Stabilizing | 0.953 | D | 0.435 | neutral | None | None | None | None | I |
D/T | 0.1818 | likely_benign | 0.2116 | benign | 0.395 | Stabilizing | 0.986 | D | 0.464 | neutral | None | None | None | None | I |
D/V | 0.1421 | likely_benign | 0.1595 | benign | 0.18 | Stabilizing | 0.991 | D | 0.579 | neutral | N | 0.495117231 | None | None | I |
D/W | 0.8204 | likely_pathogenic | 0.856 | pathogenic | -0.15 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
D/Y | 0.2022 | likely_benign | 0.2355 | benign | 0.051 | Stabilizing | 0.997 | D | 0.627 | neutral | D | 0.534616982 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.