Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6185 | 18778;18779;18780 | chr2:178729700;178729699;178729698 | chr2:179594427;179594426;179594425 |
N2AB | 5868 | 17827;17828;17829 | chr2:178729700;178729699;178729698 | chr2:179594427;179594426;179594425 |
N2A | 4941 | 15046;15047;15048 | chr2:178729700;178729699;178729698 | chr2:179594427;179594426;179594425 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1460731482 | -0.345 | 1.0 | D | 0.808 | 0.543 | 0.582074046126 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/S | rs1460731482 | -0.345 | 1.0 | D | 0.808 | 0.543 | 0.582074046126 | gnomAD-4.0.0 | 3.18279E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85865E-06 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5642 | likely_pathogenic | 0.6283 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.625140387 | None | None | I |
G/C | 0.8821 | likely_pathogenic | 0.9061 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.663729722 | None | None | I |
G/D | 0.7492 | likely_pathogenic | 0.7653 | pathogenic | -0.998 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.616873541 | None | None | I |
G/E | 0.8218 | likely_pathogenic | 0.8388 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/F | 0.9595 | likely_pathogenic | 0.9685 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/H | 0.9398 | likely_pathogenic | 0.9517 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/I | 0.9512 | likely_pathogenic | 0.961 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
G/K | 0.9194 | likely_pathogenic | 0.933 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/L | 0.9412 | likely_pathogenic | 0.9572 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/M | 0.9551 | likely_pathogenic | 0.968 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/N | 0.8524 | likely_pathogenic | 0.8764 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
G/P | 0.9954 | likely_pathogenic | 0.9969 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/Q | 0.8754 | likely_pathogenic | 0.8912 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/R | 0.8404 | likely_pathogenic | 0.8562 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.646701339 | None | None | I |
G/S | 0.4216 | ambiguous | 0.4932 | ambiguous | -0.578 | Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.611069424 | None | None | I |
G/T | 0.8207 | likely_pathogenic | 0.858 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/V | 0.8945 | likely_pathogenic | 0.9131 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.647508556 | None | None | I |
G/W | 0.9442 | likely_pathogenic | 0.9526 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/Y | 0.9397 | likely_pathogenic | 0.9537 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.