Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6187 | 18784;18785;18786 | chr2:178729694;178729693;178729692 | chr2:179594421;179594420;179594419 |
N2AB | 5870 | 17833;17834;17835 | chr2:178729694;178729693;178729692 | chr2:179594421;179594420;179594419 |
N2A | 4943 | 15052;15053;15054 | chr2:178729694;178729693;178729692 | chr2:179594421;179594420;179594419 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs758380777 | -0.092 | 0.729 | N | 0.499 | 0.281 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 5.57E-05 | None | 1.30719E-04 | None | 0 | 8.92E-06 | 0 |
A/V | rs758380777 | -0.092 | 0.729 | N | 0.499 | 0.281 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07641E-04 | 0 |
A/V | rs758380777 | -0.092 | 0.729 | N | 0.499 | 0.281 | None | gnomAD-4.0.0 | 7.43705E-06 | None | None | None | None | N | None | 5.34117E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54304E-06 | 5.4904E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.58 | likely_pathogenic | 0.6505 | pathogenic | -0.805 | Destabilizing | 0.944 | D | 0.55 | neutral | None | None | None | None | N |
A/D | 0.1552 | likely_benign | 0.1743 | benign | -0.673 | Destabilizing | 0.116 | N | 0.545 | neutral | None | None | None | None | N |
A/E | 0.1486 | likely_benign | 0.1555 | benign | -0.73 | Destabilizing | 0.001 | N | 0.247 | neutral | N | 0.521765115 | None | None | N |
A/F | 0.3764 | ambiguous | 0.4473 | ambiguous | -0.93 | Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | N |
A/G | 0.1825 | likely_benign | 0.1943 | benign | -0.974 | Destabilizing | 0.201 | N | 0.465 | neutral | N | 0.509169544 | None | None | N |
A/H | 0.4746 | ambiguous | 0.5042 | ambiguous | -1.013 | Destabilizing | 0.818 | D | 0.589 | neutral | None | None | None | None | N |
A/I | 0.2371 | likely_benign | 0.2788 | benign | -0.321 | Destabilizing | 0.69 | D | 0.577 | neutral | None | None | None | None | N |
A/K | 0.4084 | ambiguous | 0.4184 | ambiguous | -0.943 | Destabilizing | 0.116 | N | 0.501 | neutral | None | None | None | None | N |
A/L | 0.2235 | likely_benign | 0.2534 | benign | -0.321 | Destabilizing | 0.388 | N | 0.523 | neutral | None | None | None | None | N |
A/M | 0.2454 | likely_benign | 0.2688 | benign | -0.324 | Destabilizing | 0.932 | D | 0.546 | neutral | None | None | None | None | N |
A/N | 0.2156 | likely_benign | 0.25 | benign | -0.652 | Destabilizing | 0.241 | N | 0.593 | neutral | None | None | None | None | N |
A/P | 0.8625 | likely_pathogenic | 0.9175 | pathogenic | -0.424 | Destabilizing | 0.492 | N | 0.563 | neutral | D | 0.535921079 | None | None | N |
A/Q | 0.2852 | likely_benign | 0.2794 | benign | -0.831 | Destabilizing | 0.241 | N | 0.554 | neutral | None | None | None | None | N |
A/R | 0.3795 | ambiguous | 0.3898 | ambiguous | -0.581 | Destabilizing | 0.388 | N | 0.547 | neutral | None | None | None | None | N |
A/S | 0.0841 | likely_benign | 0.0898 | benign | -1.022 | Destabilizing | 0.001 | N | 0.163 | neutral | D | 0.53629185 | None | None | N |
A/T | 0.0811 | likely_benign | 0.085 | benign | -0.98 | Destabilizing | 0.193 | N | 0.471 | neutral | N | 0.510857475 | None | None | N |
A/V | 0.1249 | likely_benign | 0.1369 | benign | -0.424 | Destabilizing | 0.729 | D | 0.499 | neutral | N | 0.479859778 | None | None | N |
A/W | 0.7685 | likely_pathogenic | 0.8229 | pathogenic | -1.199 | Destabilizing | 0.981 | D | 0.643 | neutral | None | None | None | None | N |
A/Y | 0.475 | ambiguous | 0.5504 | ambiguous | -0.799 | Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.