Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6188 | 18787;18788;18789 | chr2:178729691;178729690;178729689 | chr2:179594418;179594417;179594416 |
N2AB | 5871 | 17836;17837;17838 | chr2:178729691;178729690;178729689 | chr2:179594418;179594417;179594416 |
N2A | 4944 | 15055;15056;15057 | chr2:178729691;178729690;178729689 | chr2:179594418;179594417;179594416 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs781653231 | -0.757 | 0.999 | D | 0.542 | 0.393 | 0.530309751445 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.24069E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/G | rs781653231 | -0.757 | 0.999 | D | 0.542 | 0.393 | 0.530309751445 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/G | rs781653231 | -0.757 | 0.999 | D | 0.542 | 0.393 | 0.530309751445 | gnomAD-4.0.0 | 6.40645E-06 | None | None | None | None | N | None | 6.76819E-05 | 1.69509E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1039 | likely_benign | 0.1047 | benign | -0.615 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | N |
S/C | 0.2611 | likely_benign | 0.2573 | benign | -0.38 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.529982824 | None | None | N |
S/D | 0.4444 | ambiguous | 0.3982 | ambiguous | 0.202 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
S/E | 0.5512 | ambiguous | 0.4859 | ambiguous | 0.134 | Stabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
S/F | 0.2073 | likely_benign | 0.1938 | benign | -1.028 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
S/G | 0.1236 | likely_benign | 0.1123 | benign | -0.777 | Destabilizing | 0.999 | D | 0.542 | neutral | D | 0.529222355 | None | None | N |
S/H | 0.3773 | ambiguous | 0.3276 | benign | -1.201 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/I | 0.2087 | likely_benign | 0.1838 | benign | -0.31 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.510054916 | None | None | N |
S/K | 0.6651 | likely_pathogenic | 0.5737 | pathogenic | -0.587 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
S/L | 0.1405 | likely_benign | 0.1331 | benign | -0.31 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
S/M | 0.2878 | likely_benign | 0.2738 | benign | -0.057 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
S/N | 0.1624 | likely_benign | 0.1462 | benign | -0.318 | Destabilizing | 0.999 | D | 0.577 | neutral | N | 0.504850676 | None | None | N |
S/P | 0.7404 | likely_pathogenic | 0.7563 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/Q | 0.5169 | ambiguous | 0.4418 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
S/R | 0.5082 | ambiguous | 0.4196 | ambiguous | -0.375 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.51770609 | None | None | N |
S/T | 0.0963 | likely_benign | 0.0945 | benign | -0.451 | Destabilizing | 0.999 | D | 0.51 | neutral | D | 0.524917277 | None | None | N |
S/V | 0.2242 | likely_benign | 0.2114 | benign | -0.381 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
S/W | 0.4071 | ambiguous | 0.3746 | ambiguous | -0.978 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/Y | 0.2154 | likely_benign | 0.1998 | benign | -0.731 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.