Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC619018793;18794;18795 chr2:178729685;178729684;178729683chr2:179594412;179594411;179594410
N2AB587317842;17843;17844 chr2:178729685;178729684;178729683chr2:179594412;179594411;179594410
N2A494615061;15062;15063 chr2:178729685;178729684;178729683chr2:179594412;179594411;179594410
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: AGC
  • RefSeq wild type template codon: TCG
  • Domain: Ig-45
  • Domain position: 86
  • Structural Position: 171
  • Q(SASA): 0.3151
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/R rs755474413 -0.299 0.949 N 0.726 0.467 0.531245695338 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 0 0
S/R rs755474413 -0.299 0.949 N 0.726 0.467 0.531245695338 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 0 2.07383E-04 0
S/R rs755474413 -0.299 0.949 N 0.726 0.467 0.531245695338 gnomAD-4.0.0 3.09869E-06 None None None None N None 0 0 None 0 0 None 0 0 8.47672E-07 4.39203E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.105 likely_benign 0.1016 benign -0.319 Destabilizing 0.415 N 0.522 neutral None None None None N
S/C 0.242 likely_benign 0.2644 benign -0.294 Destabilizing 0.995 D 0.706 prob.neutral D 0.558469106 None None N
S/D 0.3632 ambiguous 0.3417 ambiguous 0.17 Stabilizing 0.775 D 0.553 neutral None None None None N
S/E 0.482 ambiguous 0.4447 ambiguous 0.095 Stabilizing 0.875 D 0.55 neutral None None None None N
S/F 0.2161 likely_benign 0.2096 benign -0.82 Destabilizing 0.987 D 0.79 deleterious None None None None N
S/G 0.127 likely_benign 0.1194 benign -0.464 Destabilizing 0.008 N 0.273 neutral N 0.515068119 None None N
S/H 0.3372 likely_benign 0.3146 benign -0.94 Destabilizing 0.996 D 0.701 prob.neutral None None None None N
S/I 0.2205 likely_benign 0.2054 benign -0.067 Destabilizing 0.901 D 0.788 deleterious D 0.523475137 None None N
S/K 0.6474 likely_pathogenic 0.5858 pathogenic -0.493 Destabilizing 0.775 D 0.542 neutral None None None None N
S/L 0.1327 likely_benign 0.1265 benign -0.067 Destabilizing 0.775 D 0.723 prob.delet. None None None None N
S/M 0.2751 likely_benign 0.2624 benign 0.051 Stabilizing 0.996 D 0.7 prob.neutral None None None None N
S/N 0.1407 likely_benign 0.1286 benign -0.244 Destabilizing 0.722 D 0.567 neutral N 0.496786053 None None N
S/P 0.3201 likely_benign 0.3556 ambiguous -0.12 Destabilizing 0.987 D 0.728 prob.delet. None None None None N
S/Q 0.474 ambiguous 0.4383 ambiguous -0.446 Destabilizing 0.987 D 0.593 neutral None None None None N
S/R 0.5021 ambiguous 0.4489 ambiguous -0.309 Destabilizing 0.949 D 0.726 prob.delet. N 0.487226947 None None N
S/T 0.0971 likely_benign 0.0943 benign -0.318 Destabilizing 0.034 N 0.355 neutral N 0.482578911 None None N
S/V 0.2313 likely_benign 0.2206 benign -0.12 Destabilizing 0.923 D 0.737 prob.delet. None None None None N
S/W 0.3759 ambiguous 0.375 ambiguous -0.847 Destabilizing 0.996 D 0.765 deleterious None None None None N
S/Y 0.2173 likely_benign 0.2107 benign -0.556 Destabilizing 0.987 D 0.787 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.