Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6191 | 18796;18797;18798 | chr2:178729682;178729681;178729680 | chr2:179594409;179594408;179594407 |
N2AB | 5874 | 17845;17846;17847 | chr2:178729682;178729681;178729680 | chr2:179594409;179594408;179594407 |
N2A | 4947 | 15064;15065;15066 | chr2:178729682;178729681;178729680 | chr2:179594409;179594408;179594407 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs752079323 | -2.661 | 0.193 | N | 0.683 | 0.246 | 0.482721949076 | gnomAD-2.1.1 | 3.63E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.14E-05 | 1.65948E-04 |
I/T | rs752079323 | -2.661 | 0.193 | N | 0.683 | 0.246 | 0.482721949076 | gnomAD-4.0.0 | 2.70549E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 3.14465E-05 | 0 | 1.5124E-04 |
I/V | None | None | 0.001 | N | 0.123 | 0.09 | 0.231873229951 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76872E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1448 | likely_benign | 0.1589 | benign | -2.532 | Highly Destabilizing | 0.116 | N | 0.633 | neutral | None | None | None | None | N |
I/C | 0.7232 | likely_pathogenic | 0.7354 | pathogenic | -1.866 | Destabilizing | 0.944 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/D | 0.8316 | likely_pathogenic | 0.821 | pathogenic | -2.527 | Highly Destabilizing | 0.818 | D | 0.789 | deleterious | None | None | None | None | N |
I/E | 0.6755 | likely_pathogenic | 0.6755 | pathogenic | -2.294 | Highly Destabilizing | 0.818 | D | 0.798 | deleterious | None | None | None | None | N |
I/F | 0.1928 | likely_benign | 0.1925 | benign | -1.444 | Destabilizing | 0.627 | D | 0.723 | prob.delet. | N | 0.454868119 | None | None | N |
I/G | 0.5773 | likely_pathogenic | 0.591 | pathogenic | -3.102 | Highly Destabilizing | 0.818 | D | 0.794 | deleterious | None | None | None | None | N |
I/H | 0.6987 | likely_pathogenic | 0.701 | pathogenic | -2.491 | Highly Destabilizing | 0.981 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/K | 0.5793 | likely_pathogenic | 0.5775 | pathogenic | -1.989 | Destabilizing | 0.818 | D | 0.796 | deleterious | None | None | None | None | N |
I/L | 0.135 | likely_benign | 0.1308 | benign | -0.888 | Destabilizing | 0.041 | N | 0.406 | neutral | N | 0.463407458 | None | None | N |
I/M | 0.0766 | likely_benign | 0.0778 | benign | -0.856 | Destabilizing | 0.018 | N | 0.222 | neutral | N | 0.471184366 | None | None | N |
I/N | 0.4628 | ambiguous | 0.4437 | ambiguous | -2.277 | Highly Destabilizing | 0.912 | D | 0.797 | deleterious | D | 0.530520671 | None | None | N |
I/P | 0.8725 | likely_pathogenic | 0.8934 | pathogenic | -1.416 | Destabilizing | 0.932 | D | 0.797 | deleterious | None | None | None | None | N |
I/Q | 0.5727 | likely_pathogenic | 0.5786 | pathogenic | -2.115 | Highly Destabilizing | 0.818 | D | 0.797 | deleterious | None | None | None | None | N |
I/R | 0.4376 | ambiguous | 0.4459 | ambiguous | -1.759 | Destabilizing | 0.818 | D | 0.798 | deleterious | None | None | None | None | N |
I/S | 0.2552 | likely_benign | 0.2596 | benign | -3.04 | Highly Destabilizing | 0.324 | N | 0.752 | deleterious | N | 0.424777286 | None | None | N |
I/T | 0.0866 | likely_benign | 0.0942 | benign | -2.644 | Highly Destabilizing | 0.193 | N | 0.683 | prob.neutral | N | 0.38914456 | None | None | N |
I/V | 0.0632 | likely_benign | 0.0654 | benign | -1.416 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.442570826 | None | None | N |
I/W | 0.7867 | likely_pathogenic | 0.803 | pathogenic | -1.766 | Destabilizing | 0.981 | D | 0.741 | deleterious | None | None | None | None | N |
I/Y | 0.632 | likely_pathogenic | 0.6375 | pathogenic | -1.497 | Destabilizing | 0.818 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.