Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6193 | 18802;18803;18804 | chr2:178729676;178729675;178729674 | chr2:179594403;179594402;179594401 |
N2AB | 5876 | 17851;17852;17853 | chr2:178729676;178729675;178729674 | chr2:179594403;179594402;179594401 |
N2A | 4949 | 15070;15071;15072 | chr2:178729676;178729675;178729674 | chr2:179594403;179594402;179594401 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs778348811 | -1.617 | 0.997 | D | 0.815 | 0.531 | 0.631438196984 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7632 | likely_pathogenic | 0.7864 | pathogenic | -2.783 | Highly Destabilizing | 0.966 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/C | 0.83 | likely_pathogenic | 0.8285 | pathogenic | -2.278 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/D | 0.9914 | likely_pathogenic | 0.9941 | pathogenic | -2.976 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/E | 0.9416 | likely_pathogenic | 0.9582 | pathogenic | -2.661 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
L/F | 0.4174 | ambiguous | 0.4298 | ambiguous | -1.648 | Destabilizing | 0.997 | D | 0.815 | deleterious | D | 0.629790809 | None | None | N |
L/G | 0.9183 | likely_pathogenic | 0.9345 | pathogenic | -3.422 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.9204 | likely_pathogenic | 0.9363 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.656539746 | None | None | N |
L/I | 0.1112 | likely_benign | 0.117 | benign | -0.884 | Destabilizing | 0.955 | D | 0.634 | neutral | D | 0.570458458 | None | None | N |
L/K | 0.9364 | likely_pathogenic | 0.9508 | pathogenic | -2.095 | Highly Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
L/M | 0.1661 | likely_benign | 0.1746 | benign | -1.095 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
L/N | 0.9532 | likely_pathogenic | 0.961 | pathogenic | -2.674 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/P | 0.9705 | likely_pathogenic | 0.9824 | pathogenic | -1.504 | Destabilizing | 0.999 | D | 0.877 | deleterious | D | 0.656539746 | None | None | N |
L/Q | 0.8313 | likely_pathogenic | 0.8696 | pathogenic | -2.356 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/R | 0.8909 | likely_pathogenic | 0.916 | pathogenic | -2.086 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | D | 0.640520385 | None | None | N |
L/S | 0.9275 | likely_pathogenic | 0.9393 | pathogenic | -3.438 | Highly Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
L/T | 0.7857 | likely_pathogenic | 0.8108 | pathogenic | -2.94 | Highly Destabilizing | 0.995 | D | 0.815 | deleterious | None | None | None | None | N |
L/V | 0.1122 | likely_benign | 0.118 | benign | -1.504 | Destabilizing | 0.117 | N | 0.378 | neutral | D | 0.542978311 | None | None | N |
L/W | 0.7846 | likely_pathogenic | 0.8164 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/Y | 0.8378 | likely_pathogenic | 0.8558 | pathogenic | -1.73 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.