Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6199 | 18820;18821;18822 | chr2:178729561;178729560;178729559 | chr2:179594288;179594287;179594286 |
N2AB | 5882 | 17869;17870;17871 | chr2:178729561;178729560;178729559 | chr2:179594288;179594287;179594286 |
N2A | 4955 | 15088;15089;15090 | chr2:178729561;178729560;178729559 | chr2:179594288;179594287;179594286 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.996 | D | 0.811 | 0.635 | 0.675111477399 | gnomAD-4.0.0 | 1.59492E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.775E-05 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs758776829 | 0.257 | 0.999 | D | 0.875 | 0.612 | 0.907606656126 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6681 | likely_pathogenic | 0.6654 | pathogenic | -1.682 | Destabilizing | 0.996 | D | 0.811 | deleterious | D | 0.604243774 | None | None | N |
P/C | 0.9775 | likely_pathogenic | 0.9803 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/D | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/E | 0.9937 | likely_pathogenic | 0.9923 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/F | 0.9965 | likely_pathogenic | 0.9967 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/G | 0.9783 | likely_pathogenic | 0.9793 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/H | 0.9918 | likely_pathogenic | 0.9909 | pathogenic | -1.642 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.642227695 | None | None | N |
P/I | 0.93 | likely_pathogenic | 0.945 | pathogenic | -0.593 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
P/K | 0.9952 | likely_pathogenic | 0.994 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/L | 0.8501 | likely_pathogenic | 0.8567 | pathogenic | -0.593 | Destabilizing | 0.999 | D | 0.875 | deleterious | D | 0.604647382 | None | None | N |
P/M | 0.9742 | likely_pathogenic | 0.979 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/N | 0.9966 | likely_pathogenic | 0.9964 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/Q | 0.9858 | likely_pathogenic | 0.983 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/R | 0.983 | likely_pathogenic | 0.9811 | pathogenic | -0.877 | Destabilizing | 0.999 | D | 0.883 | deleterious | D | 0.642227695 | None | None | N |
P/S | 0.9537 | likely_pathogenic | 0.9498 | pathogenic | -1.866 | Destabilizing | 0.998 | D | 0.838 | deleterious | D | 0.641824087 | None | None | N |
P/T | 0.9317 | likely_pathogenic | 0.9273 | pathogenic | -1.62 | Destabilizing | 0.884 | D | 0.709 | prob.delet. | D | 0.62600653 | None | None | N |
P/V | 0.8441 | likely_pathogenic | 0.8659 | pathogenic | -0.924 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
P/W | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/Y | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.