Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6200 | 18823;18824;18825 | chr2:178729558;178729557;178729556 | chr2:179594285;179594284;179594283 |
N2AB | 5883 | 17872;17873;17874 | chr2:178729558;178729557;178729556 | chr2:179594285;179594284;179594283 |
N2A | 4956 | 15091;15092;15093 | chr2:178729558;178729557;178729556 | chr2:179594285;179594284;179594283 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1046417798 | None | None | N | 0.238 | 0.067 | 0.21737058555 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0655 | likely_benign | 0.0661 | benign | -0.536 | Destabilizing | None | N | 0.131 | neutral | N | 0.460580583 | None | None | N |
T/C | 0.305 | likely_benign | 0.3323 | benign | -0.407 | Destabilizing | 0.356 | N | 0.489 | neutral | None | None | None | None | N |
T/D | 0.2704 | likely_benign | 0.2746 | benign | 0.435 | Stabilizing | 0.038 | N | 0.526 | neutral | None | None | None | None | N |
T/E | 0.2067 | likely_benign | 0.2005 | benign | 0.438 | Stabilizing | 0.038 | N | 0.465 | neutral | None | None | None | None | N |
T/F | 0.1382 | likely_benign | 0.146 | benign | -0.773 | Destabilizing | 0.214 | N | 0.561 | neutral | None | None | None | None | N |
T/G | 0.1727 | likely_benign | 0.187 | benign | -0.761 | Destabilizing | 0.038 | N | 0.471 | neutral | None | None | None | None | N |
T/H | 0.1512 | likely_benign | 0.1614 | benign | -0.889 | Destabilizing | 0.676 | D | 0.513 | neutral | None | None | None | None | N |
T/I | 0.0951 | likely_benign | 0.1011 | benign | -0.043 | Destabilizing | None | N | 0.238 | neutral | N | 0.482169364 | None | None | N |
T/K | 0.1294 | likely_benign | 0.1256 | benign | -0.287 | Destabilizing | 0.038 | N | 0.49 | neutral | None | None | None | None | N |
T/L | 0.075 | likely_benign | 0.0794 | benign | -0.043 | Destabilizing | 0.006 | N | 0.342 | neutral | None | None | None | None | N |
T/M | 0.0859 | likely_benign | 0.0903 | benign | -0.102 | Destabilizing | 0.214 | N | 0.503 | neutral | None | None | None | None | N |
T/N | 0.0949 | likely_benign | 0.0963 | benign | -0.313 | Destabilizing | 0.029 | N | 0.464 | neutral | N | 0.497368103 | None | None | N |
T/P | 0.4383 | ambiguous | 0.4256 | ambiguous | -0.176 | Destabilizing | 0.171 | N | 0.567 | neutral | N | 0.514049709 | None | None | N |
T/Q | 0.1466 | likely_benign | 0.148 | benign | -0.371 | Destabilizing | 0.214 | N | 0.555 | neutral | None | None | None | None | N |
T/R | 0.0977 | likely_benign | 0.0986 | benign | -0.122 | Destabilizing | 0.214 | N | 0.569 | neutral | None | None | None | None | N |
T/S | 0.0768 | likely_benign | 0.079 | benign | -0.616 | Destabilizing | None | N | 0.14 | neutral | N | 0.4429949 | None | None | N |
T/V | 0.0846 | likely_benign | 0.0898 | benign | -0.176 | Destabilizing | 0.001 | N | 0.139 | neutral | None | None | None | None | N |
T/W | 0.4354 | ambiguous | 0.453 | ambiguous | -0.778 | Destabilizing | 0.864 | D | 0.559 | neutral | None | None | None | None | N |
T/Y | 0.1691 | likely_benign | 0.1723 | benign | -0.477 | Destabilizing | 0.356 | N | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.