Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6204 | 18835;18836;18837 | chr2:178729546;178729545;178729544 | chr2:179594273;179594272;179594271 |
N2AB | 5887 | 17884;17885;17886 | chr2:178729546;178729545;178729544 | chr2:179594273;179594272;179594271 |
N2A | 4960 | 15103;15104;15105 | chr2:178729546;178729545;178729544 | chr2:179594273;179594272;179594271 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.012 | N | 0.1 | 0.211 | 0.297718772494 | gnomAD-4.0.0 | 6.8457E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99873E-07 | 0 | 0 |
E/G | None | None | 0.801 | N | 0.36 | 0.234 | 0.502815669512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs949942051 | None | 0.454 | N | 0.252 | 0.262 | 0.346315397577 | gnomAD-4.0.0 | 1.36917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79979E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1147 | likely_benign | 0.1297 | benign | -0.758 | Destabilizing | 0.454 | N | 0.289 | neutral | N | 0.513182917 | None | None | N |
E/C | 0.7478 | likely_pathogenic | 0.7725 | pathogenic | -0.398 | Destabilizing | 0.998 | D | 0.359 | neutral | None | None | None | None | N |
E/D | 0.1688 | likely_benign | 0.1933 | benign | -0.678 | Destabilizing | 0.012 | N | 0.1 | neutral | N | 0.521053039 | None | None | N |
E/F | 0.6444 | likely_pathogenic | 0.676 | pathogenic | -0.055 | Destabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | N |
E/G | 0.1226 | likely_benign | 0.1378 | benign | -1.088 | Destabilizing | 0.801 | D | 0.36 | neutral | N | 0.503448713 | None | None | N |
E/H | 0.3687 | ambiguous | 0.3907 | ambiguous | -0.068 | Destabilizing | 0.974 | D | 0.32 | neutral | None | None | None | None | N |
E/I | 0.2904 | likely_benign | 0.3332 | benign | 0.134 | Stabilizing | 0.949 | D | 0.395 | neutral | None | None | None | None | N |
E/K | 0.0946 | likely_benign | 0.0968 | benign | -0.192 | Destabilizing | 0.454 | N | 0.252 | neutral | N | 0.475701965 | None | None | N |
E/L | 0.278 | likely_benign | 0.2997 | benign | 0.134 | Stabilizing | 0.728 | D | 0.421 | neutral | None | None | None | None | N |
E/M | 0.3303 | likely_benign | 0.3597 | ambiguous | 0.367 | Stabilizing | 0.998 | D | 0.345 | neutral | None | None | None | None | N |
E/N | 0.2198 | likely_benign | 0.2551 | benign | -0.775 | Destabilizing | 0.842 | D | 0.262 | neutral | None | None | None | None | N |
E/P | 0.2443 | likely_benign | 0.2565 | benign | -0.142 | Destabilizing | 0.016 | N | 0.18 | neutral | None | None | None | None | N |
E/Q | 0.0985 | likely_benign | 0.0991 | benign | -0.647 | Destabilizing | 0.136 | N | 0.087 | neutral | N | 0.510489329 | None | None | N |
E/R | 0.1807 | likely_benign | 0.1771 | benign | 0.165 | Stabilizing | 0.842 | D | 0.299 | neutral | None | None | None | None | N |
E/S | 0.1689 | likely_benign | 0.1923 | benign | -1.023 | Destabilizing | 0.525 | D | 0.248 | neutral | None | None | None | None | N |
E/T | 0.1506 | likely_benign | 0.1819 | benign | -0.739 | Destabilizing | 0.067 | N | 0.225 | neutral | None | None | None | None | N |
E/V | 0.1658 | likely_benign | 0.1871 | benign | -0.142 | Destabilizing | 0.669 | D | 0.409 | neutral | N | 0.518474094 | None | None | N |
E/W | 0.8459 | likely_pathogenic | 0.8657 | pathogenic | 0.289 | Stabilizing | 0.998 | D | 0.411 | neutral | None | None | None | None | N |
E/Y | 0.5 | ambiguous | 0.5344 | ambiguous | 0.23 | Stabilizing | 0.991 | D | 0.37 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.