Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6206 | 18841;18842;18843 | chr2:178729540;178729539;178729538 | chr2:179594267;179594266;179594265 |
N2AB | 5889 | 17890;17891;17892 | chr2:178729540;178729539;178729538 | chr2:179594267;179594266;179594265 |
N2A | 4962 | 15109;15110;15111 | chr2:178729540;178729539;178729538 | chr2:179594267;179594266;179594265 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.055 | N | 0.277 | 0.139 | 0.170165803431 | gnomAD-4.0.0 | 6.8456E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99857E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1871 | likely_benign | 0.2409 | benign | 0.036 | Stabilizing | None | N | 0.082 | neutral | None | None | None | None | I |
K/C | 0.51 | ambiguous | 0.5821 | pathogenic | -0.395 | Destabilizing | 0.628 | D | 0.296 | neutral | None | None | None | None | I |
K/D | 0.3126 | likely_benign | 0.3998 | ambiguous | -0.142 | Destabilizing | 0.016 | N | 0.307 | neutral | None | None | None | None | I |
K/E | 0.0928 | likely_benign | 0.1121 | benign | -0.126 | Destabilizing | None | N | 0.077 | neutral | N | 0.409847906 | None | None | I |
K/F | 0.48 | ambiguous | 0.5638 | ambiguous | -0.167 | Destabilizing | 0.214 | N | 0.368 | neutral | None | None | None | None | I |
K/G | 0.2482 | likely_benign | 0.3047 | benign | -0.147 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | I |
K/H | 0.1806 | likely_benign | 0.2159 | benign | -0.273 | Destabilizing | 0.356 | N | 0.283 | neutral | None | None | None | None | I |
K/I | 0.1891 | likely_benign | 0.238 | benign | 0.443 | Stabilizing | 0.038 | N | 0.475 | neutral | None | None | None | None | I |
K/L | 0.1653 | likely_benign | 0.2023 | benign | 0.443 | Stabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
K/M | 0.1415 | likely_benign | 0.161 | benign | -0.022 | Destabilizing | 0.171 | N | 0.283 | neutral | D | 0.523712129 | None | None | I |
K/N | 0.2032 | likely_benign | 0.2461 | benign | 0.007 | Stabilizing | 0.055 | N | 0.277 | neutral | N | 0.518631596 | None | None | I |
K/P | 0.3992 | ambiguous | 0.5406 | ambiguous | 0.334 | Stabilizing | None | N | 0.135 | neutral | None | None | None | None | I |
K/Q | 0.0824 | likely_benign | 0.0935 | benign | -0.094 | Destabilizing | 0.029 | N | 0.307 | neutral | N | 0.452675963 | None | None | I |
K/R | 0.0782 | likely_benign | 0.0869 | benign | -0.099 | Destabilizing | None | N | 0.062 | neutral | N | 0.442632328 | None | None | I |
K/S | 0.1982 | likely_benign | 0.2391 | benign | -0.377 | Destabilizing | 0.001 | N | 0.085 | neutral | None | None | None | None | I |
K/T | 0.1041 | likely_benign | 0.125 | benign | -0.221 | Destabilizing | 0.012 | N | 0.28 | neutral | N | 0.479401205 | None | None | I |
K/V | 0.1861 | likely_benign | 0.2327 | benign | 0.334 | Stabilizing | 0.016 | N | 0.322 | neutral | None | None | None | None | I |
K/W | 0.534 | ambiguous | 0.5853 | pathogenic | -0.255 | Destabilizing | 0.864 | D | 0.294 | neutral | None | None | None | None | I |
K/Y | 0.3776 | ambiguous | 0.4361 | ambiguous | 0.097 | Stabilizing | 0.628 | D | 0.356 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.