Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6213 | 18862;18863;18864 | chr2:178729519;178729518;178729517 | chr2:179594246;179594245;179594244 |
N2AB | 5896 | 17911;17912;17913 | chr2:178729519;178729518;178729517 | chr2:179594246;179594245;179594244 |
N2A | 4969 | 15130;15131;15132 | chr2:178729519;178729518;178729517 | chr2:179594246;179594245;179594244 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1489995255 | None | 0.008 | N | 0.37 | 0.123 | 0.499665682712 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41896E-04 | 0 | 0 | 0 |
Y/F | rs1489995255 | 0.004 | None | N | 0.27 | 0.129 | 0.335661160332 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Y/F | rs1489995255 | 0.004 | None | N | 0.27 | 0.129 | 0.335661160332 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.1054 | likely_benign | 0.1283 | benign | -0.801 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
Y/C | 0.1169 | likely_benign | 0.1331 | benign | 0.137 | Stabilizing | 0.008 | N | 0.37 | neutral | N | 0.43048975 | None | None | N |
Y/D | 0.0483 | likely_benign | 0.0512 | benign | 0.606 | Stabilizing | None | N | 0.258 | neutral | N | 0.309256837 | None | None | N |
Y/E | 0.1333 | likely_benign | 0.1658 | benign | 0.597 | Stabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
Y/F | 0.0905 | likely_benign | 0.1005 | benign | -0.39 | Destabilizing | None | N | 0.27 | neutral | N | 0.400860276 | None | None | N |
Y/G | 0.0791 | likely_benign | 0.0782 | benign | -1.013 | Destabilizing | None | N | 0.258 | neutral | None | None | None | None | N |
Y/H | 0.1116 | likely_benign | 0.118 | benign | 0.031 | Stabilizing | 0.001 | N | 0.293 | neutral | N | 0.374116392 | None | None | N |
Y/I | 0.181 | likely_benign | 0.2178 | benign | -0.248 | Destabilizing | None | N | 0.262 | neutral | None | None | None | None | N |
Y/K | 0.2455 | likely_benign | 0.2572 | benign | 0.083 | Stabilizing | None | N | 0.238 | neutral | None | None | None | None | N |
Y/L | 0.1855 | likely_benign | 0.2174 | benign | -0.248 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
Y/M | 0.265 | likely_benign | 0.3061 | benign | -0.111 | Destabilizing | 0.01 | N | 0.38 | neutral | None | None | None | None | N |
Y/N | 0.0377 | likely_benign | 0.038 | benign | -0.092 | Destabilizing | None | N | 0.235 | neutral | N | 0.332845773 | None | None | N |
Y/P | 0.4822 | ambiguous | 0.5174 | ambiguous | -0.414 | Destabilizing | None | N | 0.276 | neutral | None | None | None | None | N |
Y/Q | 0.1779 | likely_benign | 0.2058 | benign | -0.045 | Destabilizing | None | N | 0.262 | neutral | None | None | None | None | N |
Y/R | 0.2297 | likely_benign | 0.2275 | benign | 0.325 | Stabilizing | None | N | 0.243 | neutral | None | None | None | None | N |
Y/S | 0.06 | likely_benign | 0.065 | benign | -0.477 | Destabilizing | None | N | 0.229 | neutral | N | 0.333904565 | None | None | N |
Y/T | 0.1075 | likely_benign | 0.1344 | benign | -0.391 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
Y/V | 0.1341 | likely_benign | 0.1536 | benign | -0.414 | Destabilizing | None | N | 0.251 | neutral | None | None | None | None | N |
Y/W | 0.3978 | ambiguous | 0.4264 | ambiguous | -0.481 | Destabilizing | 0.051 | N | 0.383 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.