Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6215 | 18868;18869;18870 | chr2:178729513;178729512;178729511 | chr2:179594240;179594239;179594238 |
N2AB | 5898 | 17917;17918;17919 | chr2:178729513;178729512;178729511 | chr2:179594240;179594239;179594238 |
N2A | 4971 | 15136;15137;15138 | chr2:178729513;178729512;178729511 | chr2:179594240;179594239;179594238 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1267800654 | -0.397 | 0.309 | N | 0.307 | 0.161 | 0.254761474806 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/A | rs1267800654 | -0.397 | 0.309 | N | 0.307 | 0.161 | 0.254761474806 | gnomAD-4.0.0 | 3.18369E-06 | None | None | None | None | N | None | 5.66251E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1643 | likely_benign | 0.2033 | benign | -0.509 | Destabilizing | 0.309 | N | 0.307 | neutral | N | 0.488224892 | None | None | N |
D/C | 0.654 | likely_pathogenic | 0.7205 | pathogenic | -0.114 | Destabilizing | 0.996 | D | 0.411 | neutral | None | None | None | None | N |
D/E | 0.2113 | likely_benign | 0.2475 | benign | -0.614 | Destabilizing | 0.007 | N | 0.105 | neutral | N | 0.457189909 | None | None | N |
D/F | 0.6422 | likely_pathogenic | 0.713 | pathogenic | -0.386 | Destabilizing | 0.984 | D | 0.401 | neutral | None | None | None | None | N |
D/G | 0.1652 | likely_benign | 0.2102 | benign | -0.798 | Destabilizing | 0.472 | N | 0.293 | neutral | N | 0.471518644 | None | None | N |
D/H | 0.2709 | likely_benign | 0.3196 | benign | -0.666 | Destabilizing | 0.939 | D | 0.355 | neutral | N | 0.457137372 | None | None | N |
D/I | 0.4348 | ambiguous | 0.5147 | ambiguous | 0.233 | Stabilizing | 0.91 | D | 0.414 | neutral | None | None | None | None | N |
D/K | 0.4257 | ambiguous | 0.4998 | ambiguous | -0.312 | Destabilizing | 0.59 | D | 0.283 | neutral | None | None | None | None | N |
D/L | 0.4481 | ambiguous | 0.5171 | ambiguous | 0.233 | Stabilizing | 0.742 | D | 0.359 | neutral | None | None | None | None | N |
D/M | 0.6467 | likely_pathogenic | 0.7017 | pathogenic | 0.664 | Stabilizing | 0.996 | D | 0.395 | neutral | None | None | None | None | N |
D/N | 0.0883 | likely_benign | 0.0942 | benign | -0.604 | Destabilizing | 0.028 | N | 0.177 | neutral | N | 0.439508225 | None | None | N |
D/P | 0.5417 | ambiguous | 0.6189 | pathogenic | 0.01 | Stabilizing | 0.953 | D | 0.344 | neutral | None | None | None | None | N |
D/Q | 0.3908 | ambiguous | 0.4567 | ambiguous | -0.511 | Destabilizing | 0.59 | D | 0.288 | neutral | None | None | None | None | N |
D/R | 0.4372 | ambiguous | 0.511 | ambiguous | -0.185 | Destabilizing | 0.91 | D | 0.357 | neutral | None | None | None | None | N |
D/S | 0.1106 | likely_benign | 0.1329 | benign | -0.796 | Destabilizing | 0.101 | N | 0.155 | neutral | None | None | None | None | N |
D/T | 0.2156 | likely_benign | 0.2678 | benign | -0.572 | Destabilizing | 0.037 | N | 0.292 | neutral | None | None | None | None | N |
D/V | 0.2698 | likely_benign | 0.3228 | benign | 0.01 | Stabilizing | 0.684 | D | 0.357 | neutral | N | 0.502135552 | None | None | N |
D/W | 0.8932 | likely_pathogenic | 0.9206 | pathogenic | -0.273 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | N |
D/Y | 0.2778 | likely_benign | 0.3328 | benign | -0.182 | Destabilizing | 0.979 | D | 0.399 | neutral | N | 0.483635418 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.