Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6216 | 18871;18872;18873 | chr2:178729510;178729509;178729508 | chr2:179594237;179594236;179594235 |
N2AB | 5899 | 17920;17921;17922 | chr2:178729510;178729509;178729508 | chr2:179594237;179594236;179594235 |
N2A | 4972 | 15139;15140;15141 | chr2:178729510;178729509;178729508 | chr2:179594237;179594236;179594235 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs369242073 | -0.734 | 0.999 | N | 0.665 | 0.273 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/M | rs369242073 | -0.734 | 0.999 | N | 0.665 | 0.273 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs369242073 | -0.734 | 0.999 | N | 0.665 | 0.273 | None | gnomAD-4.0.0 | 1.54952E-05 | None | None | None | None | N | None | 6.67682E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18681E-05 | 2.19621E-05 | 6.40533E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0979 | likely_benign | 0.1095 | benign | -2.174 | Highly Destabilizing | 0.004 | N | 0.215 | neutral | N | 0.436758708 | None | None | N |
V/C | 0.714 | likely_pathogenic | 0.7505 | pathogenic | -1.457 | Destabilizing | 0.997 | D | 0.751 | deleterious | None | None | None | None | N |
V/D | 0.7121 | likely_pathogenic | 0.8375 | pathogenic | -2.401 | Highly Destabilizing | 0.988 | D | 0.808 | deleterious | None | None | None | None | N |
V/E | 0.6211 | likely_pathogenic | 0.7525 | pathogenic | -2.315 | Highly Destabilizing | 0.968 | D | 0.757 | deleterious | N | 0.516608833 | None | None | N |
V/F | 0.2846 | likely_benign | 0.3569 | ambiguous | -1.549 | Destabilizing | 0.988 | D | 0.799 | deleterious | None | None | None | None | N |
V/G | 0.2708 | likely_benign | 0.3353 | benign | -2.601 | Highly Destabilizing | 0.811 | D | 0.716 | prob.delet. | N | 0.490110787 | None | None | N |
V/H | 0.8396 | likely_pathogenic | 0.9044 | pathogenic | -2.197 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
V/I | 0.0844 | likely_benign | 0.0929 | benign | -1.034 | Destabilizing | 0.825 | D | 0.605 | neutral | None | None | None | None | N |
V/K | 0.6898 | likely_pathogenic | 0.8004 | pathogenic | -1.933 | Destabilizing | 0.976 | D | 0.764 | deleterious | None | None | None | None | N |
V/L | 0.2271 | likely_benign | 0.2913 | benign | -1.034 | Destabilizing | 0.9 | D | 0.573 | neutral | N | 0.474738306 | None | None | N |
V/M | 0.1429 | likely_benign | 0.1754 | benign | -0.724 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.477019735 | None | None | N |
V/N | 0.6025 | likely_pathogenic | 0.7304 | pathogenic | -1.827 | Destabilizing | 0.988 | D | 0.822 | deleterious | None | None | None | None | N |
V/P | 0.8976 | likely_pathogenic | 0.938 | pathogenic | -1.384 | Destabilizing | 0.988 | D | 0.771 | deleterious | None | None | None | None | N |
V/Q | 0.6432 | likely_pathogenic | 0.7507 | pathogenic | -1.895 | Destabilizing | 0.988 | D | 0.784 | deleterious | None | None | None | None | N |
V/R | 0.6128 | likely_pathogenic | 0.7327 | pathogenic | -1.433 | Destabilizing | 0.988 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.2738 | likely_benign | 0.3485 | ambiguous | -2.381 | Highly Destabilizing | 0.851 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/T | 0.1321 | likely_benign | 0.164 | benign | -2.177 | Highly Destabilizing | 0.919 | D | 0.618 | neutral | None | None | None | None | N |
V/W | 0.9048 | likely_pathogenic | 0.9444 | pathogenic | -1.882 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.753 | likely_pathogenic | 0.8204 | pathogenic | -1.617 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.