Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6217 | 18874;18875;18876 | chr2:178729507;178729506;178729505 | chr2:179594234;179594233;179594232 |
N2AB | 5900 | 17923;17924;17925 | chr2:178729507;178729506;178729505 | chr2:179594234;179594233;179594232 |
N2A | 4973 | 15142;15143;15144 | chr2:178729507;178729506;178729505 | chr2:179594234;179594233;179594232 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.014 | N | 0.421 | 0.208 | 0.190952846119 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99578E-07 | 1.15942E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0887 | likely_benign | 0.0964 | benign | -0.715 | Destabilizing | 0.003 | N | 0.347 | neutral | N | 0.467694904 | None | None | N |
E/C | 0.5267 | ambiguous | 0.6147 | pathogenic | -0.434 | Destabilizing | None | N | 0.423 | neutral | None | None | None | None | N |
E/D | 0.117 | likely_benign | 0.1307 | benign | -1.035 | Destabilizing | None | N | 0.234 | neutral | N | 0.477642539 | None | None | N |
E/F | 0.3142 | likely_benign | 0.3667 | ambiguous | -0.343 | Destabilizing | 0.022 | N | 0.525 | neutral | None | None | None | None | N |
E/G | 0.1214 | likely_benign | 0.1327 | benign | -1.044 | Destabilizing | 0.014 | N | 0.421 | neutral | N | 0.469859576 | None | None | N |
E/H | 0.1968 | likely_benign | 0.2299 | benign | -0.623 | Destabilizing | None | N | 0.369 | neutral | None | None | None | None | N |
E/I | 0.1113 | likely_benign | 0.1337 | benign | 0.169 | Stabilizing | 0.003 | N | 0.441 | neutral | None | None | None | None | N |
E/K | 0.0853 | likely_benign | 0.0924 | benign | -0.726 | Destabilizing | None | N | 0.251 | neutral | N | 0.406222371 | None | None | N |
E/L | 0.1327 | likely_benign | 0.1501 | benign | 0.169 | Stabilizing | None | N | 0.453 | neutral | None | None | None | None | N |
E/M | 0.1707 | likely_benign | 0.1914 | benign | 0.518 | Stabilizing | 0.002 | N | 0.402 | neutral | None | None | None | None | N |
E/N | 0.1372 | likely_benign | 0.1632 | benign | -1.025 | Destabilizing | 0.018 | N | 0.425 | neutral | None | None | None | None | N |
E/P | 0.5924 | likely_pathogenic | 0.6063 | pathogenic | -0.104 | Destabilizing | 0.085 | N | 0.499 | neutral | None | None | None | None | N |
E/Q | 0.0792 | likely_benign | 0.085 | benign | -0.9 | Destabilizing | None | N | 0.248 | neutral | N | 0.453418885 | None | None | N |
E/R | 0.1287 | likely_benign | 0.1381 | benign | -0.448 | Destabilizing | 0.009 | N | 0.429 | neutral | None | None | None | None | N |
E/S | 0.1055 | likely_benign | 0.1219 | benign | -1.295 | Destabilizing | 0.009 | N | 0.347 | neutral | None | None | None | None | N |
E/T | 0.0944 | likely_benign | 0.1098 | benign | -1.039 | Destabilizing | None | N | 0.263 | neutral | None | None | None | None | N |
E/V | 0.0818 | likely_benign | 0.0924 | benign | -0.104 | Destabilizing | None | N | 0.351 | neutral | N | 0.421343752 | None | None | N |
E/W | 0.5795 | likely_pathogenic | 0.6224 | pathogenic | -0.191 | Destabilizing | 0.55 | D | 0.453 | neutral | None | None | None | None | N |
E/Y | 0.2785 | likely_benign | 0.3268 | benign | -0.146 | Destabilizing | 0.001 | N | 0.363 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.