Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6219 | 18880;18881;18882 | chr2:178729501;178729500;178729499 | chr2:179594228;179594227;179594226 |
N2AB | 5902 | 17929;17930;17931 | chr2:178729501;178729500;178729499 | chr2:179594228;179594227;179594226 |
N2A | 4975 | 15148;15149;15150 | chr2:178729501;178729500;178729499 | chr2:179594228;179594227;179594226 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1282711943 | -1.031 | 0.896 | D | 0.498 | 0.167 | 0.126345400529 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1282711943 | -1.031 | 0.896 | D | 0.498 | 0.167 | 0.126345400529 | gnomAD-4.0.0 | 6.84296E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52003E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs72648948 | -0.522 | 0.896 | N | 0.496 | 0.178 | None | gnomAD-2.1.1 | 5.72E-05 | None | None | None | None | N | None | 6.61704E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs72648948 | -0.522 | 0.896 | N | 0.496 | 0.178 | None | gnomAD-3.1.2 | 2.16917E-04 | None | None | None | None | N | None | 6.99773E-04 | 1.96618E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
E/K | rs72648948 | -0.522 | 0.896 | N | 0.496 | 0.178 | None | gnomAD-4.0.0 | 3.03693E-05 | None | None | None | None | N | None | 6.00897E-04 | 5.00334E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60128E-05 |
E/Q | rs72648948 | -0.708 | 0.984 | N | 0.568 | 0.293 | 0.37262878642 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs72648948 | -0.708 | 0.984 | N | 0.568 | 0.293 | 0.37262878642 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs72648948 | -0.708 | 0.984 | N | 0.568 | 0.293 | 0.37262878642 | gnomAD-4.0.0 | 3.71869E-06 | None | None | None | None | N | None | 5.34131E-05 | 0 | None | 0 | 2.22876E-05 | None | 0 | 0 | 0 | 0 | 1.60128E-05 |
E/V | rs2080005563 | None | 0.938 | D | 0.627 | 0.438 | 0.759310620552 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1145 | likely_benign | 0.1307 | benign | -0.71 | Destabilizing | 0.811 | D | 0.531 | neutral | N | 0.487569342 | None | None | N |
E/C | 0.7283 | likely_pathogenic | 0.7975 | pathogenic | -0.457 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/D | 0.2086 | likely_benign | 0.2585 | benign | -1.275 | Destabilizing | 0.896 | D | 0.498 | neutral | D | 0.52218919 | None | None | N |
E/F | 0.5936 | likely_pathogenic | 0.6506 | pathogenic | -0.618 | Destabilizing | 0.988 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/G | 0.1663 | likely_benign | 0.1879 | benign | -1.049 | Destabilizing | 0.026 | N | 0.447 | neutral | N | 0.494027803 | None | None | N |
E/H | 0.3803 | ambiguous | 0.4284 | ambiguous | -1.055 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
E/I | 0.2324 | likely_benign | 0.2918 | benign | 0.201 | Stabilizing | 0.976 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/K | 0.1582 | likely_benign | 0.1705 | benign | -0.79 | Destabilizing | 0.896 | D | 0.496 | neutral | N | 0.521495756 | None | None | N |
E/L | 0.2851 | likely_benign | 0.34 | ambiguous | 0.201 | Stabilizing | 0.952 | D | 0.65 | neutral | None | None | None | None | N |
E/M | 0.3424 | ambiguous | 0.3922 | ambiguous | 0.67 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/N | 0.2662 | likely_benign | 0.3386 | benign | -1.046 | Destabilizing | 0.976 | D | 0.531 | neutral | None | None | None | None | N |
E/P | 0.8276 | likely_pathogenic | 0.8473 | pathogenic | -0.081 | Destabilizing | 0.988 | D | 0.645 | neutral | None | None | None | None | N |
E/Q | 0.0983 | likely_benign | 0.1075 | benign | -0.931 | Destabilizing | 0.984 | D | 0.568 | neutral | N | 0.499485688 | None | None | N |
E/R | 0.2421 | likely_benign | 0.2458 | benign | -0.69 | Destabilizing | 0.988 | D | 0.549 | neutral | None | None | None | None | N |
E/S | 0.1606 | likely_benign | 0.1966 | benign | -1.384 | Destabilizing | 0.851 | D | 0.479 | neutral | None | None | None | None | N |
E/T | 0.1486 | likely_benign | 0.1848 | benign | -1.11 | Destabilizing | 0.132 | N | 0.415 | neutral | None | None | None | None | N |
E/V | 0.1453 | likely_benign | 0.1764 | benign | -0.081 | Destabilizing | 0.938 | D | 0.627 | neutral | D | 0.531752822 | None | None | N |
E/W | 0.8324 | likely_pathogenic | 0.8474 | pathogenic | -0.588 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/Y | 0.5452 | ambiguous | 0.6078 | pathogenic | -0.427 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.