Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC622118886;18887;18888 chr2:178729495;178729494;178729493chr2:179594222;179594221;179594220
N2AB590417935;17936;17937 chr2:178729495;178729494;178729493chr2:179594222;179594221;179594220
N2A497715154;15155;15156 chr2:178729495;178729494;178729493chr2:179594222;179594221;179594220
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-46
  • Domain position: 23
  • Structural Position: 34
  • Q(SASA): 0.5932
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D rs369544339 -1.044 0.92 D 0.405 0.115 0.24896430686 gnomAD-2.1.1 8.58E-05 None None None None I None 4.14E-05 2.83E-05 None 1.06507E-03 0 None 3.27E-05 None 0 6.26E-05 2.80978E-04
E/D rs369544339 -1.044 0.92 D 0.405 0.115 0.24896430686 gnomAD-3.1.2 1.05162E-04 None None None None I None 2.41E-05 6.55E-05 0 2.59815E-03 0 None 0 0 5.88E-05 2.07039E-04 0
E/D rs369544339 -1.044 0.92 D 0.405 0.115 0.24896430686 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
E/D rs369544339 -1.044 0.92 D 0.405 0.115 0.24896430686 gnomAD-4.0.0 1.11549E-04 None None None None I None 1.33305E-05 6.668E-05 None 1.6563E-03 0 None 0 0 9.15529E-05 4.39174E-05 2.24086E-04
E/G rs1365356147 -1.39 0.959 N 0.552 0.355 0.527660502957 gnomAD-4.0.0 1.5917E-06 None None None None I None 0 2.28739E-05 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.228 likely_benign 0.2373 benign -1.282 Destabilizing 0.826 D 0.459 neutral N 0.520514321 None None I
E/C 0.9005 likely_pathogenic 0.9149 pathogenic -0.779 Destabilizing 0.999 D 0.58 neutral None None None None I
E/D 0.436 ambiguous 0.4155 ambiguous -1.446 Destabilizing 0.92 D 0.405 neutral D 0.529037804 None None I
E/F 0.8121 likely_pathogenic 0.8164 pathogenic -0.845 Destabilizing 0.982 D 0.581 neutral None None None None I
E/G 0.4572 ambiguous 0.4215 ambiguous -1.677 Destabilizing 0.959 D 0.552 neutral N 0.493912444 None None I
E/H 0.6035 likely_pathogenic 0.574 pathogenic -1.056 Destabilizing 0.1 N 0.27 neutral None None None None I
E/I 0.3727 ambiguous 0.4082 ambiguous -0.176 Destabilizing 0.884 D 0.566 neutral None None None None I
E/K 0.2338 likely_benign 0.1951 benign -1.154 Destabilizing 0.852 D 0.431 neutral N 0.508891818 None None I
E/L 0.4844 ambiguous 0.5254 ambiguous -0.176 Destabilizing 0.02 N 0.429 neutral None None None None I
E/M 0.4514 ambiguous 0.4769 ambiguous 0.449 Stabilizing 0.982 D 0.569 neutral None None None None I
E/N 0.5581 ambiguous 0.5622 ambiguous -1.5 Destabilizing 0.939 D 0.466 neutral None None None None I
E/P 0.9848 likely_pathogenic 0.974 pathogenic -0.526 Destabilizing 0.997 D 0.573 neutral None None None None I
E/Q 0.1539 likely_benign 0.1545 benign -1.342 Destabilizing 0.31 N 0.285 neutral N 0.47941706 None None I
E/R 0.3685 ambiguous 0.3085 benign -0.912 Destabilizing 0.939 D 0.465 neutral None None None None I
E/S 0.3481 ambiguous 0.3528 ambiguous -2.025 Highly Destabilizing 0.939 D 0.421 neutral None None None None I
E/T 0.3223 likely_benign 0.3263 benign -1.678 Destabilizing 0.969 D 0.482 neutral None None None None I
E/V 0.2335 likely_benign 0.2511 benign -0.526 Destabilizing 0.852 D 0.529 neutral D 0.527480366 None None I
E/W 0.9448 likely_pathogenic 0.9326 pathogenic -0.682 Destabilizing 0.999 D 0.585 neutral None None None None I
E/Y 0.778 likely_pathogenic 0.7656 pathogenic -0.596 Destabilizing 0.982 D 0.569 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.