Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6222 | 18889;18890;18891 | chr2:178729492;178729491;178729490 | chr2:179594219;179594218;179594217 |
N2AB | 5905 | 17938;17939;17940 | chr2:178729492;178729491;178729490 | chr2:179594219;179594218;179594217 |
N2A | 4978 | 15157;15158;15159 | chr2:178729492;178729491;178729490 | chr2:179594219;179594218;179594217 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.994 | N | 0.655 | 0.537 | 0.689150956925 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4316 | ambiguous | 0.4627 | ambiguous | -1.73 | Destabilizing | 0.994 | D | 0.655 | neutral | N | 0.510788478 | None | None | N |
V/C | 0.9068 | likely_pathogenic | 0.9358 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
V/D | 0.9777 | likely_pathogenic | 0.9737 | pathogenic | -2.39 | Highly Destabilizing | 0.999 | D | 0.822 | deleterious | D | 0.623840275 | None | None | N |
V/E | 0.9551 | likely_pathogenic | 0.9498 | pathogenic | -2.091 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.5514 | ambiguous | 0.5285 | ambiguous | -0.94 | Destabilizing | 0.997 | D | 0.788 | deleterious | D | 0.56174159 | None | None | N |
V/G | 0.5553 | ambiguous | 0.5819 | pathogenic | -2.333 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | D | 0.591801553 | None | None | N |
V/H | 0.9846 | likely_pathogenic | 0.9857 | pathogenic | -2.337 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/I | 0.0994 | likely_benign | 0.1074 | benign | -0.005 | Destabilizing | 0.543 | D | 0.239 | neutral | D | 0.525600428 | None | None | N |
V/K | 0.9708 | likely_pathogenic | 0.9683 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/L | 0.3378 | likely_benign | 0.4212 | ambiguous | -0.005 | Destabilizing | 0.217 | N | 0.283 | neutral | D | 0.573099844 | None | None | N |
V/M | 0.3573 | ambiguous | 0.3791 | ambiguous | -0.159 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/N | 0.9411 | likely_pathogenic | 0.9456 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9744 | likely_pathogenic | 0.9774 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
V/Q | 0.9589 | likely_pathogenic | 0.959 | pathogenic | -1.36 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/R | 0.9539 | likely_pathogenic | 0.9531 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/S | 0.7864 | likely_pathogenic | 0.8123 | pathogenic | -2.27 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/T | 0.6577 | likely_pathogenic | 0.6778 | pathogenic | -1.808 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.9813 | likely_pathogenic | 0.9808 | pathogenic | -1.541 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.9263 | likely_pathogenic | 0.9185 | pathogenic | -1.094 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.