Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6223 | 18892;18893;18894 | chr2:178729489;178729488;178729487 | chr2:179594216;179594215;179594214 |
N2AB | 5906 | 17941;17942;17943 | chr2:178729489;178729488;178729487 | chr2:179594216;179594215;179594214 |
N2A | 4979 | 15160;15161;15162 | chr2:178729489;178729488;178729487 | chr2:179594216;179594215;179594214 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs794727817 | -0.231 | 0.004 | D | 0.18 | 0.111 | 0.437634105008 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.9E-06 | 0 |
T/M | rs794727817 | -0.231 | 0.004 | D | 0.18 | 0.111 | 0.437634105008 | gnomAD-4.0.0 | 1.50547E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52042E-05 | None | 0 | 0 | 1.70918E-05 | 2.31889E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0663 | likely_benign | 0.0697 | benign | -0.712 | Destabilizing | None | N | 0.063 | neutral | N | 0.463236886 | None | None | N |
T/C | 0.3291 | likely_benign | 0.3967 | ambiguous | -0.439 | Destabilizing | 0.356 | N | 0.277 | neutral | None | None | None | None | N |
T/D | 0.2751 | likely_benign | 0.3102 | benign | 0.432 | Stabilizing | 0.038 | N | 0.275 | neutral | None | None | None | None | N |
T/E | 0.1798 | likely_benign | 0.2026 | benign | 0.431 | Stabilizing | 0.016 | N | 0.294 | neutral | None | None | None | None | N |
T/F | 0.1416 | likely_benign | 0.165 | benign | -0.867 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
T/G | 0.1726 | likely_benign | 0.2123 | benign | -0.948 | Destabilizing | 0.016 | N | 0.257 | neutral | None | None | None | None | N |
T/H | 0.1566 | likely_benign | 0.1868 | benign | -1.134 | Destabilizing | 0.356 | N | 0.312 | neutral | None | None | None | None | N |
T/I | 0.1127 | likely_benign | 0.127 | benign | -0.183 | Destabilizing | 0.038 | N | 0.277 | neutral | None | None | None | None | N |
T/K | 0.111 | likely_benign | 0.1194 | benign | -0.411 | Destabilizing | None | N | 0.147 | neutral | N | 0.480763855 | None | None | N |
T/L | 0.0748 | likely_benign | 0.0809 | benign | -0.183 | Destabilizing | 0.006 | N | 0.291 | neutral | None | None | None | None | N |
T/M | 0.0727 | likely_benign | 0.0744 | benign | -0.085 | Destabilizing | 0.004 | N | 0.18 | neutral | D | 0.525229495 | None | None | N |
T/N | 0.1047 | likely_benign | 0.1148 | benign | -0.362 | Destabilizing | 0.001 | N | 0.181 | neutral | None | None | None | None | N |
T/P | 0.4478 | ambiguous | 0.458 | ambiguous | -0.327 | Destabilizing | 0.055 | N | 0.332 | neutral | N | 0.508978506 | None | None | N |
T/Q | 0.133 | likely_benign | 0.1519 | benign | -0.467 | Destabilizing | 0.072 | N | 0.332 | neutral | None | None | None | None | N |
T/R | 0.0818 | likely_benign | 0.0839 | benign | -0.247 | Destabilizing | 0.07 | N | 0.271 | neutral | N | 0.489538053 | None | None | N |
T/S | 0.0796 | likely_benign | 0.0919 | benign | -0.713 | Destabilizing | None | N | 0.099 | neutral | N | 0.4428989 | None | None | N |
T/V | 0.1076 | likely_benign | 0.1183 | benign | -0.327 | Destabilizing | 0.016 | N | 0.219 | neutral | None | None | None | None | N |
T/W | 0.3418 | ambiguous | 0.3908 | ambiguous | -0.805 | Destabilizing | 0.864 | D | 0.312 | neutral | None | None | None | None | N |
T/Y | 0.1879 | likely_benign | 0.2189 | benign | -0.546 | Destabilizing | 0.12 | N | 0.397 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.