Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6225 | 18898;18899;18900 | chr2:178729483;178729482;178729481 | chr2:179594210;179594209;179594208 |
N2AB | 5908 | 17947;17948;17949 | chr2:178729483;178729482;178729481 | chr2:179594210;179594209;179594208 |
N2A | 4981 | 15166;15167;15168 | chr2:178729483;178729482;178729481 | chr2:179594210;179594209;179594208 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs794727818 | None | 0.948 | D | 0.528 | 0.224 | 0.32471235697 | gnomAD-4.0.0 | 1.36859E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31356E-05 |
T/K | None | None | 0.997 | N | 0.612 | 0.363 | 0.589254406313 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
T/S | None | None | 0.775 | N | 0.28 | 0.127 | 0.234412748748 | gnomAD-4.0.0 | 6.84296E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99575E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2609 | likely_benign | 0.2835 | benign | -0.405 | Destabilizing | 0.948 | D | 0.528 | neutral | D | 0.528440371 | None | None | I |
T/C | 0.8122 | likely_pathogenic | 0.8508 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
T/D | 0.6334 | likely_pathogenic | 0.662 | pathogenic | 0.148 | Stabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | I |
T/E | 0.5873 | likely_pathogenic | 0.6229 | pathogenic | 0.106 | Stabilizing | 0.998 | D | 0.614 | neutral | None | None | None | None | I |
T/F | 0.4423 | ambiguous | 0.5331 | ambiguous | -0.817 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
T/G | 0.5769 | likely_pathogenic | 0.5838 | pathogenic | -0.564 | Destabilizing | 0.992 | D | 0.645 | neutral | None | None | None | None | I |
T/H | 0.4962 | ambiguous | 0.5811 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/I | 0.4104 | ambiguous | 0.5351 | ambiguous | -0.097 | Destabilizing | 0.998 | D | 0.671 | neutral | N | 0.504776865 | None | None | I |
T/K | 0.4916 | ambiguous | 0.5687 | pathogenic | -0.409 | Destabilizing | 0.997 | D | 0.612 | neutral | N | 0.500619052 | None | None | I |
T/L | 0.226 | likely_benign | 0.2843 | benign | -0.097 | Destabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | I |
T/M | 0.156 | likely_benign | 0.1836 | benign | -0.205 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
T/N | 0.2465 | likely_benign | 0.2907 | benign | -0.298 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
T/P | 0.4028 | ambiguous | 0.5097 | ambiguous | -0.17 | Destabilizing | 0.998 | D | 0.67 | neutral | N | 0.494317291 | None | None | I |
T/Q | 0.4743 | ambiguous | 0.5367 | ambiguous | -0.431 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
T/R | 0.4426 | ambiguous | 0.5235 | ambiguous | -0.125 | Destabilizing | 0.998 | D | 0.663 | neutral | D | 0.523477269 | None | None | I |
T/S | 0.1777 | likely_benign | 0.1839 | benign | -0.504 | Destabilizing | 0.775 | D | 0.28 | neutral | N | 0.454732046 | None | None | I |
T/V | 0.365 | ambiguous | 0.4742 | ambiguous | -0.17 | Destabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | I |
T/W | 0.7647 | likely_pathogenic | 0.8035 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
T/Y | 0.504 | ambiguous | 0.5672 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.